Source code for struphy.propagators.poisson_solve

import logging
from dataclasses import dataclass
from typing import Callable, Literal

from feectools.linalg.stencil import StencilVector

from struphy.io.options import LiteralOptions, OptionsBase
from struphy.linear_algebra.solver import SolverParameters
from struphy.models.variables import FEECVariable, PICVariable, SPHVariable
from struphy.pic.accumulation.filter import FilterParameters
from struphy.pic.accumulation.particles_to_grid import ParticlesToGrid
from struphy.propagators.implicit_diffusion import ImplicitDiffusion
from struphy.utils.utils import check_option

logger = logging.getLogger("struphy")


[docs] class PoissonSolve(ImplicitDiffusion): r""" Weak discretization of the (stabilized) Poisson equation: find :math:`\phi \in H^1` such that .. math:: \epsilon \int_\Omega \psi\, \phi\,\textrm d \mathbf x + \int_\Omega \nabla \psi^\top \, \nabla \phi \,\textrm d \mathbf x = \sum_i \int_\Omega \psi\, \rho_i(\mathbf x)\,\textrm d \mathbf x \qquad \forall \ \psi \in H^1\,, where :math:`\epsilon \in \mathbb R` is a stabilization parameter. Boundary terms from integration by parts are assumed to vanish. The equation is discretized as .. math:: \left( \epsilon\,\mathbb S + \mathbb G^\top \mathbb M^1 \mathbb G \right)\, \boldsymbol{\phi} = \sum_i(\Lambda^0, \rho_i )_{L^2}\,, where :math:`\mathbb M^1` is the :math:`H(\textnormal{curl})`-mass matrix and :math:`\mathbb S` is a stabilization matrix. """
[docs] @dataclass(repr=False) class Options(OptionsBase): """Configuration options for :class:`Poisson`. Parameters ---------- stab_eps : float, default=0.0 Stabilization weight used for the mass-like term in the Poisson operator. Internally mapped to ``sigma_1 = stab_eps`` in the parent :class:`ImplicitDiffusion` formulation. stab_mat : {"M0", "M0ad", "Id"}, default="Id" Stabilization matrix multiplied by ``stab_eps``. - ``"M0"``: standard weighted 0-form mass operator. - ``"M0ad"``: adiabatic-electron weighted 0-form mass operator. - ``"Id"``: identity operator. diffusion_mat : {"M1", "M1perp", "M1gyro"}, defaults="M1" Diffusion matrix. - ``"M1"``: standard weighted 1-form mass operator. - ``"M1perp"``: weighted 1-form mass operator perpendicular to magnetic field. - ``"M1para"``: weighted 1-form mass operator parallele to magnetic field. - ``"M1gyro"``: weighted 1-form mass operator used in gyrokinetic model. x0 : StencilVector, default=None Initial guess for the iterative linear solver. solver : LiteralOptions.OptsSymmSolver, default="pcg" Name of the symmetric iterative solver passed to :func:`psydac.linalg.solvers.inverse`. precond : LiteralOptions.OptsMassPrecond, default="MassMatrixPreconditioner" Name of the preconditioner configuration. Currently this class inherits the same behavior as :class:`ImplicitDiffusion`, where ``pc=None`` is used internally. solver_params : SolverParameters, default=None Iterative-solver controls (for example ``tol``, ``maxiter``, ``verbose``, ``info``, ``recycle``). If ``None``, defaults to ``SolverParameters()``. filter_params : dict[PICVariable | SPHVariable, FilterParameters], default=None If not None, specifies a filter to the accumulation of a specific variable. Notes ----- ``Poisson.Options`` reuses :class:`ImplicitDiffusion` internals by enforcing ``sigma_2 = 0.0``, ``sigma_3 = 1.0``, ``divide_by_dt = False`` and ``diffusion_mat = "M1"`` in ``__post_init__``. """ # specific literals OptsStabMat = Literal["M0", "M0ad", "Id"] OptsDiffusionMat = Literal["M1", "M1perp", "M1para", "M1gyro"] # propagator options stab_eps: float = 0.0 stab_mat: OptsStabMat = "Id" diffusion_mat: OptsDiffusionMat = "M1" x0: StencilVector = None solver: LiteralOptions.OptsSymmSolver = "pcg" precond: LiteralOptions.OptsMassPrecond = "MassMatrixPreconditioner" solver_params: SolverParameters = None filter_params: dict[PICVariable | SPHVariable, FilterParameters] = None def __post_init__(self): # checks check_option(self.stab_mat, self.OptsStabMat) check_option(self.diffusion_mat, self.OptsDiffusionMat) check_option(self.solver, LiteralOptions.OptsSymmSolver) check_option(self.precond, LiteralOptions.OptsMassPrecond) # defaults if self.solver_params is None: self.solver_params = SolverParameters() # Poisson solve (-> set some params of parent class) self.sigma_1 = self.stab_eps self.sigma_2 = 0.0 self.sigma_3 = 1.0 self.divide_by_dt = False
def __init__( self, rho: FEECVariable | Callable | ParticlesToGrid | list = None, rho_coeffs: float | list = None, ): """ Parameters ---------- rho : FEECVariable or Callable or ParticlesToGrid or list, default=None Right-hand side source term(s) of the Poisson problem. Accepted entries are: - ``None``: zero source. - ``FEECVariable`` in ``H1``. - ``Callable`` to be projected to ``H1`` via ``L2Projector``. - :class:`~struphy.pic.accumulation.particles_to_grid.ParticlesToGrid`, describing a particle-to-grid (charge/current) deposition. - a ``list`` containing any mix of the entries above. rho_coeffs : float or list, default=None Multiplicative coefficient(s) applied to ``rho``. If ``None``, coefficients default to ``1.0`` for all sources. """ super().__init__(rho=rho, rho_coeffs=rho_coeffs) @property def options(self) -> Options: if not hasattr(self, "_options"): self._options = self.Options() return self._options @options.setter def options(self, new): assert isinstance(new, self.Options) self._options = new logger.info(f"\nNew options for propagator '{self.__class__.__name__}':\n{self._options}")