Index

_

__available_methods__ (struphy.ode.utils.ButcherTableau attribute)

__call__() (struphy.geometry.base.Domain method) __weakref__ (struphy.geometry.base.Domain attribute)

A

A (struphy.linear_algebra.saddle_point.SaddlePointSolver property) (struphy.linear_algebra.schur_solver.SchurSolver property) a (struphy.ode.utils.ButcherTableau property) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) a1 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] a1() (struphy.fields_background.base.FluidEquilibriumWithB method) a1_1() (struphy.fields_background.base.FluidEquilibriumWithB method) a1_2() (struphy.fields_background.base.FluidEquilibriumWithB method) a1_3() (struphy.fields_background.base.FluidEquilibriumWithB method) a2 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] a2() (struphy.fields_background.base.FluidEquilibriumWithB method) a2_1() (struphy.fields_background.base.FluidEquilibriumWithB method) a2_2() (struphy.fields_background.base.FluidEquilibriumWithB method) a2_3() (struphy.fields_background.base.FluidEquilibriumWithB method) a_xyz() (struphy.fields_background.equils.HomogenSlab method) (struphy.fields_background.equils.ShearFluid method) absB0 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] absB0() (struphy.fields_background.base.FluidEquilibriumWithB method) absB0_h (struphy.pic.particles.Particles5D property) absB3 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] absB3() (struphy.fields_background.base.FluidEquilibriumWithB method) accfilter (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) Accumulator (class in struphy.pic.accumulation.particles_to_grid) AccumulatorVector (class in struphy.pic.accumulation.particles_to_grid) add_background() (struphy.models.variables.FEECVariable method) (struphy.models.variables.PICVariable method) (struphy.models.variables.SPHVariable method) add_data() (struphy.io.output_handling.DataContainer method) add_eval_kernel() (struphy.propagators.base.Propagator method) add_init_kernel() (struphy.propagators.base.Propagator method) add_initial_condition() (struphy.models.variables.PICVariable method) add_option() (struphy.models.base.StruphyModel class method) add_perturbation (struphy.kinetic_background.base.Maxwellian property) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian property) add_perturbation() (struphy.models.variables.FEECVariable method) (struphy.models.variables.SPHVariable method) add_refined_space() (psydac.fem.tensor.TensorFemSpace method) add_scalar() (struphy.models.base.StruphyModel method) add_time_state() (struphy.models.base.StruphyModel method) (struphy.propagators.base.Propagator method) AdhocTorus (class in struphy.fields_background.equils) AdhocTorusQPsi (class in struphy.fields_background.equils) AdiabaticPhi (class in struphy.propagators.propagators_fields) algo (struphy.ode.utils.ButcherTableau attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_fields.Maxwell.Options attribute) (struphy.propagators.propagators_fields.ShearAlfven.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) (struphy.propagators.propagators_markers.PushVinSPHpressure.Options attribute) (struphy.propagators.propagators_markers.PushVxB.Options attribute) allocate() (struphy.propagators.base.Propagator method) (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb method) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB method) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent method) (struphy.propagators.propagators_coupling.EfieldWeights method) (struphy.propagators.propagators_coupling.PressureCoupling6D method) (struphy.propagators.propagators_coupling.VlasovAmpere method) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity method) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity method) (struphy.propagators.propagators_fields.Hall method) (struphy.propagators.propagators_fields.HasegawaWakatani method) (struphy.propagators.propagators_fields.ImplicitDiffusion method) (struphy.propagators.propagators_fields.JxBCold method) (struphy.propagators.propagators_fields.Magnetosonic method) (struphy.propagators.propagators_fields.MagnetosonicUniform method) (struphy.propagators.propagators_fields.Maxwell method) (struphy.propagators.propagators_fields.OhmCold method) (struphy.propagators.propagators_fields.ShearAlfven method) (struphy.propagators.propagators_fields.ShearAlfvenB1 method) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D method) (struphy.propagators.propagators_fields.TimeDependentSource method) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull method) (struphy.propagators.propagators_fields.VariationalDensityEvolve method) (struphy.propagators.propagators_fields.VariationalEntropyEvolve method) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve method) (struphy.propagators.propagators_fields.VariationalMomentumAdvection method) (struphy.propagators.propagators_fields.VariationalPBEvolve method) (struphy.propagators.propagators_fields.VariationalQBEvolve method) (struphy.propagators.propagators_fields.VariationalResistivity method) (struphy.propagators.propagators_fields.VariationalViscosity method) (struphy.propagators.propagators_markers.PushDeterministicDiffusion method) (struphy.propagators.propagators_markers.PushEta method) (struphy.propagators.propagators_markers.PushEtaPC method) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar method) (struphy.propagators.propagators_markers.PushGuidingCenterParallel method) (struphy.propagators.propagators_markers.PushRandomDiffusion method) (struphy.propagators.propagators_markers.PushVinEfield method) (struphy.propagators.propagators_markers.PushVinSPHpressure method) (struphy.propagators.propagators_markers.PushVxB method)

allocate_feec() (struphy.models.base.StruphyModel method) allocate_helpers() (struphy.models.base.StruphyModel method) (struphy.models.fluid.ColdPlasma method) (struphy.models.fluid.EulerSPH method) (struphy.models.fluid.HasegawaWakatani method) (struphy.models.fluid.LinearExtendedMHDuniform method) (struphy.models.fluid.LinearMHD method) (struphy.models.fluid.ViscoResistiveDeltafMHD method) (struphy.models.fluid.ViscoResistiveDeltafMHD_with_q method) (struphy.models.fluid.ViscoResistiveLinearMHD method) (struphy.models.fluid.ViscoResistiveLinearMHD_with_q method) (struphy.models.fluid.ViscoResistiveMHD method) (struphy.models.fluid.ViscoResistiveMHD_with_p method) (struphy.models.fluid.ViscoResistiveMHD_with_q method) (struphy.models.fluid.ViscousFluid method) (struphy.models.hybrid.ColdPlasmaVlasov method) (struphy.models.hybrid.LinearMHDDriftkineticCC method) (struphy.models.hybrid.LinearMHDVlasovCC method) (struphy.models.hybrid.LinearMHDVlasovPC method) (struphy.models.kinetic.DriftKineticElectrostaticAdiabatic method) (struphy.models.kinetic.LinearVlasovAmpereOneSpecies method) (struphy.models.kinetic.VlasovAmpereOneSpecies method) (struphy.models.kinetic.VlasovMaxwellOneSpecies method) (struphy.models.toy.DeterministicParticleDiffusion method) (struphy.models.toy.GuidingCenter method) (struphy.models.toy.Maxwell method) (struphy.models.toy.Poisson method) (struphy.models.toy.PressureLessSPH method) (struphy.models.toy.RandomParticleDiffusion method) (struphy.models.toy.ShearAlfven method) (struphy.models.toy.TwoFluidQuasiNeutralToy method) (struphy.models.toy.VariationalBarotropicFluid method) (struphy.models.toy.VariationalCompressibleFluid method) (struphy.models.toy.VariationalPressurelessFluid method) (struphy.models.toy.Vlasov method) allocate_propagators() (struphy.models.base.StruphyModel method) allocate_variables() (struphy.models.base.StruphyModel method) alpha (struphy.propagators.propagators_coupling.EfieldWeights.Options attribute) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) apply_essential_bc_to_array() (in module struphy.feec.utilities) apply_givens_rotation() (psydac.linalg.solvers.GMRES method) apply_kinetic_bc() (struphy.pic.base.Particles method) apply_three_point_filter_3d() (in module struphy.pic.accumulation.filter_kernels) Apre (struphy.linear_algebra.saddle_point.SaddlePointSolver property) args_derham (struphy.feec.psydac_derham.Derham property) args_domain (struphy.geometry.base.Domain property) (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) (struphy.pic.pushing.pusher.Pusher property) args_kernel (struphy.pic.pushing.pusher.Pusher property) args_markers (struphy.pic.base.Particles property) arnoldi() (psydac.linalg.solvers.GMRES method) assemble() (struphy.feec.basis_projection_ops.BasisProjectionOperator method) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal method) (struphy.feec.mass.WeightedMassOperator method) assemble_M_un() (struphy.feec.variational_utilities.KineticEnergyEvaluator method) assemble_M_un1() (struphy.feec.variational_utilities.KineticEnergyEvaluator method) assign_box_to_each_particle() (in module struphy.pic.sorting_kernels) assign_particles_to_boxes() (in module struphy.pic.sorting_kernels) av (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] av() (struphy.fields_background.base.FluidEquilibriumWithB method) av_1() (struphy.fields_background.base.FluidEquilibriumWithB method) av_2() (struphy.fields_background.base.FluidEquilibriumWithB method) av_3() (struphy.fields_background.base.FluidEquilibriumWithB method) axis_spaces (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) AxisymmMHDequilibrium (class in struphy.fields_background.base) axpy() (struphy.polar.basic.PolarDerhamSpace method)

B

B (struphy.io.options.Units property) (struphy.linear_algebra.saddle_point.SaddlePointSolver property) b (struphy.ode.utils.ButcherTableau property) (struphy.propagators.propagators_fields.Hall.Variables property) (struphy.propagators.propagators_fields.Maxwell.Variables property) (struphy.propagators.propagators_fields.ShearAlfven.Variables property) (struphy.propagators.propagators_fields.ShearAlfvenB1.Variables property) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Variables property) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalPBEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalQBEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalResistivity.Variables property) B0 (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) b1 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] b1() (struphy.fields_background.base.FluidEquilibriumWithB method) b1_1() (struphy.fields_background.base.FluidEquilibriumWithB method) b1_2() (struphy.fields_background.base.FluidEquilibriumWithB method) b1_3() (struphy.fields_background.base.FluidEquilibriumWithB method) b2 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] b2() (struphy.fields_background.base.FluidEquilibriumWithB method) b2_1() (struphy.fields_background.base.FluidEquilibriumWithB method) b2_2() (struphy.fields_background.base.FluidEquilibriumWithB method) b2_3() (struphy.fields_background.base.FluidEquilibriumWithB method) b2_var (struphy.propagators.propagators_markers.PushVxB.Options attribute) b_cart() (struphy.fields_background.base.FluidEquilibriumWithB method) b_d_splines_slim() (in module struphy.bsplines.bsplines_kernels) b_der_splines_slim() (in module struphy.bsplines.bsplines_kernels) b_field (struphy.propagators.propagators_fields.Magnetosonic.Options attribute) b_spl_1st_der_slim() (in module struphy.bsplines.bsplines_kernels) b_splines_slim() (in module struphy.bsplines.bsplines_kernels) b_tilde (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) b_xyz() (struphy.fields_background.base.AxisymmMHDequilibrium method) (struphy.fields_background.base.CartesianFluidEquilibriumWithB method) (struphy.fields_background.base.CartesianMHDequilibrium method) (struphy.fields_background.equils.CurrentSheet method) (struphy.fields_background.equils.HomogenSlab method) (struphy.fields_background.equils.HomogenSlabITG method) (struphy.fields_background.equils.ScrewPinch method) (struphy.fields_background.equils.ShearedSlab method) (struphy.fields_background.equils.ShearFluid method) (struphy.fields_background.generic.GenericCartesianFluidEquilibriumWithB method) backend() (psydac.linalg.block.BlockLinearOperator method) background (struphy.pic.base.Particles property) backgrounds (struphy.feec.psydac_derham.SplineFunction property) base_extraction_op (struphy.feec.projectors.CommutingProjector property) BaseUnits (class in struphy.io.options) basis_ders_on_quad_grid() (in module struphy.bsplines.bsplines) basis_funs() (in module struphy.bsplines.bsplines) (in module struphy.bsplines.bsplines_kernels) basis_funs_1st_der() (in module struphy.bsplines.bsplines) (in module struphy.bsplines.bsplines_kernels) basis_funs_all() (in module struphy.bsplines.bsplines_kernels) basis_funs_all_ders() (in module struphy.bsplines.bsplines) (in module struphy.bsplines.bsplines_kernels) basis_funs_and_der() (in module struphy.bsplines.bsplines_kernels) basis_ops (struphy.models.base.StruphyModel property) (struphy.propagators.base.Propagator property) BasisProjectionOperator (class in struphy.feec.basis_projection_ops) BasisProjectionOperatorLocal (class in struphy.feec.basis_projection_ops) BasisProjectionOperators (class in struphy.feec.basis_projection_ops) bc (struphy.feec.linear_operators.BoundaryOperator property) BC (struphy.linear_algebra.schur_solver.SchurSolver property) bc (struphy.pic.base.Particles property) bc_refill (struphy.pic.base.Particles property) bc_sph (struphy.pic.base.Particles property) (struphy.pic.base.Particles.SortingBoxes property) bc_sph_index_shifts (struphy.pic.base.Particles.SortingBoxes property) bc_type (struphy.propagators.propagators_markers.PushDeterministicDiffusion.Options attribute) (struphy.propagators.propagators_markers.PushRandomDiffusion.Options attribute) beta (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) BiConjugateGradient (class in psydac.linalg.solvers)

BiConjugateGradientStabilized (class in psydac.linalg.solvers) bin_edges (struphy.pic.utilities.BinningPlot property) binning() (struphy.pic.base.Particles method) BinningPlot (class in struphy.pic.utilities), [1] blockcount (psydac.feec.global_projectors.GlobalProjector property) BlockLinearOperator (class in psydac.linalg.block) blocks (psydac.linalg.block.BlockLinearOperator property) (psydac.linalg.block.BlockVector property) blocks_e3 (struphy.polar.linear_operators.PolarExtractionOperator property) (struphy.polar.linear_operators.PolarLinearOperator property) blocks_e3_shapes (struphy.polar.linear_operators.PolarLinearOperator property) blocks_pol_to_pol (struphy.polar.linear_operators.PolarLinearOperator property) blocks_pol_to_pol_shapes (struphy.polar.linear_operators.PolarLinearOperator property) blocks_pol_to_ten (struphy.polar.linear_operators.PolarLinearOperator property) blocks_pol_to_ten_shapes (struphy.polar.linear_operators.PolarLinearOperator property) blocks_ten_to_pol (struphy.polar.linear_operators.PolarExtractionOperator property) blocks_ten_to_pol_shapes (struphy.polar.linear_operators.PolarExtractionOperator property) blocks_ten_to_ten (struphy.polar.linear_operators.PolarExtractionOperator property) blocks_ten_to_ten_shapes (struphy.polar.linear_operators.PolarExtractionOperator property) BlockVector (class in psydac.linalg.block) boundary_cut (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) boundary_op (struphy.feec.projectors.CommutingProjector property) boundary_ops (struphy.feec.psydac_derham.Derham property) boundary_params (struphy.pic.base.Particles property) boundary_pts_R (struphy.fields_background.equils.AdhocTorus property) (struphy.fields_background.equils.AdhocTorusQPsi property) (struphy.fields_background.equils.EQDSKequilibrium property) boundary_pts_Z (struphy.fields_background.equils.AdhocTorus property) (struphy.fields_background.equils.AdhocTorusQPsi property) (struphy.fields_background.equils.EQDSKequilibrium property) BoundaryOperator (class in struphy.feec.linear_operators) BoundaryParameters (class in struphy.pic.utilities), [1] box_based_evaluation_flat() (in module struphy.pic.sph_eval_kernels) box_based_evaluation_meshgrid() (in module struphy.pic.sph_eval_kernels) box_index (struphy.pic.base.Particles.SortingBoxes property) box_widths (struphy.pic.base.Tesselation property) boxed_based_kernel() (in module struphy.pic.sph_eval_kernels) boxes (struphy.pic.base.Particles.SortingBoxes property) boxes_per_dim (struphy.pic.base.Particles property) (struphy.pic.base.Tesselation property) Bp (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) BracketOperator (class in struphy.feec.variational_utilities) branches (struphy.dispersion_relations.base.ContinuousSpectra1D property) (struphy.dispersion_relations.base.DispersionRelations1D property) breakpoints() (in module struphy.bsplines.bsplines) breaks (psydac.fem.tensor.TensorFemSpace property) (struphy.feec.psydac_derham.Derham property) breaks_loc (struphy.feec.psydac_derham.Derham property) bstar_2form() (in module struphy.pic.pushing.eval_kernels_gc) bstar_parallel_3form() (in module struphy.pic.pushing.eval_kernels_gc) bt2 (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) bufsize (struphy.pic.base.Particles property) bulk_species (struphy.models.base.StruphyModel property) butcher (struphy.ode.solvers.ODEsolverFEEC property) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) (struphy.propagators.propagators_fields.Maxwell.Options attribute) (struphy.propagators.propagators_fields.ShearAlfven.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) (struphy.propagators.propagators_markers.PushDeterministicDiffusion.Options attribute) (struphy.propagators.propagators_markers.PushEta.Options attribute) (struphy.propagators.propagators_markers.PushEtaPC.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) (struphy.propagators.propagators_markers.PushRandomDiffusion.Options attribute) ButcherTableau (class in struphy.ode.utils) bv (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] bv() (struphy.fields_background.base.FluidEquilibriumWithB method) (struphy.fields_background.base.LogicalFluidEquilibriumWithB method) (struphy.fields_background.base.LogicalMHDequilibrium method) (struphy.fields_background.equils.DESCequilibrium method) (struphy.fields_background.equils.GVECequilibrium method) bv_1() (struphy.fields_background.base.FluidEquilibriumWithB method) bv_2() (struphy.fields_background.base.FluidEquilibriumWithB method) bv_3() (struphy.fields_background.base.FluidEquilibriumWithB method)

C

c (struphy.ode.utils.ButcherTableau property) c_fun (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) calculate_guiding_center_from_6d() (in module struphy.post_processing.orbits.orbits_kernels) CanonicalMaxwellian (class in struphy.kinetic_background.maxwellians) CartesianFluidEquilibrium (class in struphy.fields_background.base) CartesianFluidEquilibriumWithB (class in struphy.fields_background.base) CartesianMHDequilibrium (class in struphy.fields_background.base) cc_lin_mhd_5d_curlb() (in module struphy.pic.accumulation.accum_kernels_gc) cc_lin_mhd_5d_D() (in module struphy.pic.accumulation.accum_kernels_gc) cc_lin_mhd_5d_gradB() (in module struphy.pic.accumulation.accum_kernels_gc) cc_lin_mhd_5d_gradB_dg() (in module struphy.pic.accumulation.accum_kernels_gc) cc_lin_mhd_5d_gradB_dg_init() (in module struphy.pic.accumulation.accum_kernels_gc) cc_lin_mhd_5d_M() (in module struphy.pic.accumulation.accum_kernels_gc) cc_lin_mhd_6d_1() (in module struphy.pic.accumulation.accum_kernels) cc_lin_mhd_6d_2() (in module struphy.pic.accumulation.accum_kernels) cell_averages() (struphy.pic.base.Tesselation method) charge_density_0form() (in module struphy.pic.accumulation.accum_kernels) check_and_assign_particles_to_boxes() (struphy.pic.base.Particles method) check_blocks() (in module struphy.polar.linear_operators) check_maxw_params() (struphy.kinetic_background.base.Maxwellian method) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian method) CircularTokamak (class in struphy.fields_background.equils) clone_config (struphy.models.base.StruphyModel property) (struphy.pic.base.Particles property) clone_id (struphy.pic.base.Particles property) CoaxialWaveguideElectric_r (class in struphy.initial.perturbations), [1] CoaxialWaveguideElectric_theta (class in struphy.initial.perturbations), [1] CoaxialWaveguideMagnetic (class in struphy.initial.perturbations), [1] codomain (psydac.linalg.basic.LinearOperator property) (psydac.linalg.block.BlockLinearOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal property) (struphy.feec.basis_projection_ops.CoordinateInclusion property) (struphy.feec.basis_projection_ops.CoordinateProjector property) (struphy.feec.linear_operators.BoundaryOperator property) (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner property) (struphy.feec.preconditioner.MassMatrixPreconditioner property) (struphy.feec.projectors.ProjectorPreconditioner property) (struphy.feec.variational_utilities.BracketOperator property) (struphy.feec.variational_utilities.Hdiv0_transport_operator property) (struphy.feec.variational_utilities.L2_transport_operator property) (struphy.feec.variational_utilities.Pressure_transport_operator property) (struphy.polar.linear_operators.PolarExtractionOperator property) (struphy.polar.linear_operators.PolarLinearOperator property) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G property) codomain_femspace (struphy.feec.mass.WeightedMassOperator property) coeff_space (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) (struphy.feec.projectors.CommutingProjectorLocal property) coeffs (struphy.propagators.propagators_fields.ImplicitDiffusion property) ColdPlasma (class in struphy.kinetic_background.maxwellians) (class in struphy.models.fluid) ColdPlasma.Electrons (class in struphy.models.fluid) ColdPlasma.EMFields (class in struphy.models.fluid) ColdPlasma.Propagators (class in struphy.models.fluid) ColdPlasma1D (class in struphy.dispersion_relations.analytic) ColdPlasmaVlasov (class in struphy.models.hybrid) ColdPlasmaVlasov.EMFields (class in struphy.models.hybrid) ColdPlasmaVlasov.HotElectrons (class in struphy.models.hybrid) ColdPlasmaVlasov.Propagators (class in struphy.models.hybrid) ColdPlasmaVlasov.ThermalElectrons (class in struphy.models.hybrid) Colella (class in struphy.geometry.domains) colella() (in module struphy.geometry.mappings_kernels) colella_df() (in module struphy.geometry.mappings_kernels) collocation_matrix() (in module struphy.bsplines.bsplines) comm (struphy.feec.psydac_derham.Derham property) (struphy.pic.base.Particles.SortingBoxes property) (struphy.polar.basic.PolarDerhamSpace property) communicate (struphy.pic.base.Particles.SortingBoxes property) communicate_boxes() (struphy.pic.base.Particles method) CommutingProjector (class in struphy.feec.projectors) CommutingProjectorLocal (class in struphy.feec.projectors) compare_arrays() (in module struphy.feec.utilities) compare_cprofile_data() (in module struphy.post_processing.cprofile_analyser) component_spaces (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) compute_interface_matrices_transpose() (psydac.linalg.block.BlockLinearOperator method) compute_interpolant() (psydac.fem.tensor.TensorFemSpace method) compute_plasma_params() (struphy.models.base.StruphyModel method) conj() (psydac.linalg.block.BlockLinearOperator method) conjugate() (psydac.linalg.block.BlockLinearOperator method) (psydac.linalg.block.BlockVector method) (psydac.linalg.stencil.StencilVector method) (struphy.polar.basic.PolarVector method)

ConjugateGradient (class in psydac.linalg.solvers) ConstantVelocity (class in struphy.fields_background.equils) ContinuousSpectra1D (class in struphy.dispersion_relations.base) control_variate (struphy.pic.base.Particles property) conv_rate (struphy.ode.utils.ButcherTableau property) convolution() (in module struphy.bsplines.bsplines_kernels) (in module struphy.bsplines.shapefunc_kernels) convolution_der() (in module struphy.bsplines.bsplines_kernels) (in module struphy.bsplines.shapefunc_kernels) CoordinateInclusion (class in struphy.feec.basis_projection_ops) CoordinateProjector (class in struphy.feec.basis_projection_ops) coords (struphy.kinetic_background.base.KineticBackground property) (struphy.kinetic_background.base.ScalarMultiplyKineticBackground property) (struphy.kinetic_background.base.SumKineticBackground property) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian property) (struphy.kinetic_background.maxwellians.ColdPlasma property) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D property) (struphy.kinetic_background.maxwellians.Maxwellian3D property) (struphy.pic.particles.Particles3D property) (struphy.pic.particles.Particles5D property) (struphy.pic.particles.Particles6D property) (struphy.pic.particles.ParticlesSPH property) copy() (psydac.linalg.block.BlockLinearOperator method) (psydac.linalg.block.BlockVector method) (psydac.linalg.stencil.StencilVector method) (struphy.feec.mass.WeightedMassOperator method) (struphy.polar.basic.PolarVector method) create_basis_op() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) create_equal_random_arrays() (in module struphy.feec.utilities) create_femfields() (in module struphy.post_processing.post_processing_tools) create_interface_space() (psydac.fem.tensor.TensorFemSpace method) create_spline_function() (struphy.feec.psydac_derham.Derham method) create_vtk() (in module struphy.post_processing.post_processing_tools) create_weight_weightedmatrix_hybrid() (in module struphy.feec.utilities) create_weighted_mass() (struphy.feec.mass.WeightedMassOperators method) cross() (in module struphy.linear_algebra.linalg_kernels) Cuboid (class in struphy.geometry.domains) cuboid() (in module struphy.geometry.mappings_kernels) cuboid_df() (in module struphy.geometry.mappings_kernels) curl (struphy.feec.psydac_derham.Derham property) curl_bcfree (struphy.feec.psydac_derham.Derham property) curl_e3 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) curl_pol_to_pol (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) curl_pol_to_ten (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) curl_unit_b1 (struphy.fields_background.projected_equils.ProjectedMHDequilibrium property), [1] curl_unit_b1() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b1_1() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b1_2() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b1_3() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b2 (struphy.fields_background.projected_equils.ProjectedMHDequilibrium property), [1] curl_unit_b2() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b2_1() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b2_2() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b2_3() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b_cart() (struphy.fields_background.base.MHDequilibrium method) curl_unit_b_dot_b0 (struphy.fields_background.projected_equils.ProjectedMHDequilibrium property), [1] curl_unit_b_dot_b0() (struphy.fields_background.base.MHDequilibrium method) curl_unit_bv (struphy.fields_background.projected_equils.ProjectedMHDequilibrium property), [1] curl_unit_bv() (struphy.fields_background.base.MHDequilibrium method) curl_unit_bv_1() (struphy.fields_background.base.MHDequilibrium method) curl_unit_bv_2() (struphy.fields_background.base.MHDequilibrium method) curl_unit_bv_3() (struphy.fields_background.base.MHDequilibrium method) CurrentCoupling5DCurlb (class in struphy.propagators.propagators_coupling) CurrentCoupling5DCurlb.Options (class in struphy.propagators.propagators_coupling) CurrentCoupling5DCurlb.Variables (class in struphy.propagators.propagators_coupling) CurrentCoupling5DDensity (class in struphy.propagators.propagators_fields) CurrentCoupling5DDensity.Options (class in struphy.propagators.propagators_fields) CurrentCoupling5DDensity.Variables (class in struphy.propagators.propagators_fields) CurrentCoupling5DGradB (class in struphy.propagators.propagators_coupling) CurrentCoupling5DGradB.Options (class in struphy.propagators.propagators_coupling) CurrentCoupling5DGradB.Variables (class in struphy.propagators.propagators_coupling) CurrentCoupling6DCurrent (class in struphy.propagators.propagators_coupling) CurrentCoupling6DCurrent.Options (class in struphy.propagators.propagators_coupling) CurrentCoupling6DCurrent.Variables (class in struphy.propagators.propagators_coupling) CurrentCoupling6DDensity (class in struphy.propagators.propagators_fields) CurrentCoupling6DDensity.Options (class in struphy.propagators.propagators_fields) CurrentCoupling6DDensity.Variables (class in struphy.propagators.propagators_fields) CurrentCoupling6DParallel (class in struphy.dispersion_relations.analytic) CurrentSheet (class in struphy.fields_background.equils) cx (struphy.geometry.base.Domain property) (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) cy (struphy.geometry.base.Domain property) (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) cz (struphy.geometry.base.Domain property)

D

d (struphy.polar.basic.PolarDerhamSpace property) d0 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) d1 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) D1_dt (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) d2 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) d2ener_drho2() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) d2ener_ds2() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) D_RL() (struphy.dispersion_relations.analytic.CurrentCoupling6DParallel method) (struphy.dispersion_relations.analytic.PressureCouplingFull6DParallel method) D_sonic() (struphy.dispersion_relations.analytic.PressureCouplingFull6DParallel method) d_splines_slim() (in module struphy.bsplines.bsplines_kernels) DataContainer (class in struphy.io.output_handling) default_background() (struphy.pic.base.Particles class method) (struphy.pic.particles.DeltaFParticles6D class method) (struphy.pic.particles.Particles3D class method) (struphy.pic.particles.Particles5D class method) (struphy.pic.particles.Particles6D class method) (struphy.pic.particles.ParticlesSPH class method) default_maxw_params() (struphy.kinetic_background.maxwellians.ColdPlasma class method) degree (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) DeltaFParticles6D (class in struphy.pic.particles) dener_drho() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) dener_ds() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) Derham (class in struphy.feec.psydac_derham) derham (struphy.feec.basis_projection_ops.BasisProjectionOperators property) (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) (struphy.feec.psydac_derham.SplineFunction property) (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] (struphy.models.base.StruphyModel property) (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) (struphy.pic.particles.Particles5D property) (struphy.propagators.base.Propagator property) DerhamOptions (class in struphy.io.options) derivatives (struphy.feec.psydac_derham.DiscreteDerham property) derivatives_as_matrices (struphy.feec.psydac_derham.DiscreteDerham property) derive_units() (struphy.io.options.Units method) desc_eval() (struphy.fields_background.equils.DESCequilibrium method) descend_options_dict() (in module struphy.io.setup) DESCequilibrium (class in struphy.fields_background.equils) DESCunit (class in struphy.geometry.domains) det() (in module struphy.linear_algebra.linalg_kernels) det4() (in module struphy.linear_algebra.linalg_kernels) det_df() (in module struphy.geometry.evaluation_kernels) determine_markers_in_box() (struphy.pic.base.Particles method) DeterministicParticleDiffusion (class in struphy.models.toy) DeterministicParticleDiffusion.Hydrogen (class in struphy.models.toy) DeterministicParticleDiffusion.Propagators (class in struphy.models.toy) df (struphy.pic.utilities.BinningPlot property) df() (in module struphy.geometry.evaluation_kernels) DF() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) df_inv() (in module struphy.geometry.evaluation_kernels) DFinv() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) (struphy.feec.mass.WeightedMassOperatorsOldForTesting method) DFinvT() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) DFT() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) dg_solver_params (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) diagnostic_species (struphy.models.base.StruphyModel property) diagnostics_dct() (struphy.models.base.StruphyModel static method) diagonal() (psydac.linalg.block.BlockLinearOperator method) (struphy.feec.mass.StencilMatrixFreeMassOperator method) dict_transformations (struphy.geometry.base.Domain property) diff_coeff (struphy.propagators.propagators_markers.PushDeterministicDiffusion.Options attribute) (struphy.propagators.propagators_markers.PushRandomDiffusion.Options attribute) diffusion_mat (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) dim (psydac.feec.global_projectors.GlobalProjector property) (struphy.feec.psydac_derham.DiscreteDerham property) dim_nz (struphy.feec.linear_operators.BoundaryOperator property) dim_nz_pol (struphy.feec.linear_operators.BoundaryOperator property) dim_nz_tor (struphy.feec.linear_operators.BoundaryOperator property) dimension (struphy.polar.basic.PolarDerhamSpace property) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) dims_mask (struphy.pic.base.Tesselation property) dirichlet_bc (struphy.feec.psydac_derham.Derham property) DiscreteDerham (class in struphy.feec.psydac_derham) DispersionRelations1D (class in struphy.dispersion_relations.base) distance() (in module struphy.pic.sph_eval_kernels) div (struphy.feec.psydac_derham.Derham property) div_bcfree (struphy.feec.psydac_derham.Derham property) div_e3 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) div_pol_to_pol (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) div_pol_to_ten (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) div_u (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) divide_by_dt (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) do_sort() (struphy.pic.base.Particles method) dof_operator (struphy.feec.basis_projection_ops.BasisProjectionOperator property) dofs_extraction_op (struphy.feec.projectors.CommutingProjector property) dofs_extraction_ops (struphy.feec.psydac_derham.Derham property) Domain (class in struphy.geometry.base) domain (psydac.linalg.basic.LinearOperator property) (psydac.linalg.block.BlockLinearOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal property) (struphy.feec.basis_projection_ops.BasisProjectionOperators property) (struphy.feec.basis_projection_ops.CoordinateInclusion property) (struphy.feec.basis_projection_ops.CoordinateProjector property) (struphy.feec.linear_operators.BoundaryOperator property) (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner property) (struphy.feec.preconditioner.MassMatrixPreconditioner property) (struphy.feec.projectors.ProjectorPreconditioner property) (struphy.feec.psydac_derham.SplineFunction property) (struphy.feec.variational_utilities.BracketOperator property) (struphy.feec.variational_utilities.Hdiv0_transport_operator property) (struphy.feec.variational_utilities.L2_transport_operator property) (struphy.feec.variational_utilities.Pressure_transport_operator property) (struphy.fields_background.base.AxisymmMHDequilibrium property) (struphy.fields_background.base.CartesianFluidEquilibrium property) (struphy.fields_background.base.CartesianFluidEquilibriumWithB property) (struphy.fields_background.base.CartesianMHDequilibrium property) (struphy.fields_background.base.FluidEquilibrium property) (struphy.fields_background.base.FluidEquilibriumWithB property) (struphy.fields_background.base.LogicalFluidEquilibrium property) (struphy.fields_background.base.LogicalFluidEquilibriumWithB property) (struphy.fields_background.base.LogicalMHDequilibrium property) (struphy.fields_background.base.MHDequilibrium property) (struphy.fields_background.base.NumericalFluidEquilibrium property) (struphy.fields_background.base.NumericalFluidEquilibriumWithB property) (struphy.fields_background.base.NumericalMHDequilibrium property) (struphy.models.base.StruphyModel property) (struphy.pic.base.Particles property) (struphy.polar.linear_operators.PolarExtractionOperator property) (struphy.polar.linear_operators.PolarLinearOperator property) (struphy.propagators.base.Propagator property) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G property)

domain_array (struphy.feec.psydac_derham.Derham property) (struphy.pic.base.Particles property) domain_decomposition (psydac.fem.tensor.TensorFemSpace property) (struphy.feec.psydac_derham.Derham property) domain_femspace (struphy.feec.mass.WeightedMassOperator property) dot() (psydac.linalg.basic.LinearOperator method) (psydac.linalg.block.BlockLinearOperator method) (psydac.linalg.solvers.BiConjugateGradient method) (psydac.linalg.solvers.BiConjugateGradientStabilized method) (psydac.linalg.solvers.ConjugateGradient method) (psydac.linalg.solvers.GMRES method) (psydac.linalg.solvers.LSMR method) (psydac.linalg.solvers.MinimumResidual method) (psydac.linalg.solvers.PBiConjugateGradientStabilized method) (psydac.linalg.solvers.PConjugateGradient method) (struphy.feec.basis_projection_ops.BasisProjectionOperator method) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal method) (struphy.feec.basis_projection_ops.CoordinateInclusion method) (struphy.feec.basis_projection_ops.CoordinateProjector method) (struphy.feec.linear_operators.BoundaryOperator method) (struphy.feec.mass.StencilMatrixFreeMassOperator method) (struphy.feec.mass.WeightedMassOperator method) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner method) (struphy.feec.preconditioner.MassMatrixPreconditioner method) (struphy.feec.projectors.ProjectorPreconditioner method) (struphy.feec.variational_utilities.BracketOperator method) (struphy.feec.variational_utilities.Hdiv0_transport_operator method) (struphy.feec.variational_utilities.L2_transport_operator method) (struphy.feec.variational_utilities.Pressure_transport_operator method) (struphy.linear_algebra.schur_solver.SchurSolverFull method) (struphy.linear_algebra.schur_solver.SchurSolverFull3 method) (struphy.polar.basic.PolarVector method) (struphy.polar.linear_operators.PolarExtractionOperator method) (struphy.polar.linear_operators.PolarLinearOperator method) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G method) dot_inner() (psydac.linalg.basic.LinearOperator method) dot_inner_tp_rings() (in module struphy.polar.linear_operators) dot_parts_of_polar() (in module struphy.polar.linear_operators) dot_pol_pol() (in module struphy.polar.linear_operators) draw_markers() (struphy.pic.base.Particles method) (struphy.pic.base.Tesselation method) (struphy.pic.particles.Particles5D method) driftkinetic_hamiltonian() (in module struphy.pic.pushing.eval_kernels_gc) DriftKineticElectrostaticAdiabatic (class in struphy.models.kinetic) DriftKineticElectrostaticAdiabatic.EMFields (class in struphy.models.kinetic) DriftKineticElectrostaticAdiabatic.KineticIons (class in struphy.models.kinetic) DriftKineticElectrostaticAdiabatic.Propagators (class in struphy.models.kinetic) dset_dict (struphy.io.output_handling.DataContainer property) dtype (psydac.fem.tensor.TensorFemSpace property) (psydac.linalg.basic.LinearOperator property) (psydac.linalg.block.BlockLinearOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal property) (struphy.feec.basis_projection_ops.CoordinateInclusion property) (struphy.feec.basis_projection_ops.CoordinateProjector property) (struphy.feec.linear_operators.BoundaryOperator property) (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner property) (struphy.feec.preconditioner.MassMatrixPreconditioner property) (struphy.feec.projectors.ProjectorPreconditioner property) (struphy.feec.variational_utilities.BracketOperator property) (struphy.feec.variational_utilities.Hdiv0_transport_operator property) (struphy.feec.variational_utilities.L2_transport_operator property) (struphy.feec.variational_utilities.Pressure_transport_operator property) (struphy.polar.basic.PolarDerhamSpace property) (struphy.polar.basic.PolarVector property) (struphy.polar.linear_operators.PolarExtractionOperator property) (struphy.polar.linear_operators.PolarLinearOperator property) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G property)

E

e (struphy.propagators.propagators_coupling.EfieldWeights.Variables property) (struphy.propagators.propagators_coupling.VlasovAmpere.Variables property) (struphy.propagators.propagators_fields.Maxwell.Variables property) (struphy.propagators.propagators_fields.OhmCold.Variables property) e_field (struphy.propagators.propagators_markers.PushVinEfield.Options attribute) e_ten_to_pol (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) EfieldWeights (class in struphy.propagators.propagators_coupling) EfieldWeights.Options (class in struphy.propagators.propagators_coupling) EfieldWeights.Variables (class in struphy.propagators.propagators_coupling) elements_spans() (in module struphy.bsplines.bsplines) end_update_interface_ghost_regions() (psydac.linalg.block.BlockVector method) ends (psydac.linalg.stencil.StencilVector property) (struphy.feec.psydac_derham.SplineFunction property) (struphy.pic.base.Tesselation property) (struphy.polar.basic.PolarDerhamSpace property) ener() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) energetic_ions (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Variables property) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Variables property) (struphy.propagators.propagators_coupling.PressureCoupling6D.Variables property) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) EnvironmentOptions (class in struphy.io.options) ep_scale (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_coupling.PressureCoupling6D.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) eps_norm (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) epsilon (struphy.pic.particles.Particles5D property) epsilon_from (struphy.propagators.propagators_fields.Hall.Options attribute) eq (struphy.fields_background.equils.DESCequilibrium property) EQDSKequilibrium (class in struphy.fields_background.equils) equation_params (struphy.models.base.StruphyModel property) (struphy.pic.base.Particles property) EquationParameters (class in struphy.models.species.Species) equil (struphy.feec.psydac_derham.SplineFunction property) (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] (struphy.kinetic_background.base.SumKineticBackground property) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian property) (struphy.kinetic_background.maxwellians.ColdPlasma property) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D property) (struphy.models.base.StruphyModel property) (struphy.pic.base.Particles property) Erf_z (class in struphy.initial.perturbations), [1] ET (struphy.feec.psydac_derham.SplineFunction property) eta (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) eta() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) eta_a (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) eta_lims (psydac.fem.tensor.TensorFemSpace property) EulerSPH (class in struphy.models.fluid) EulerSPH.EulerFluid (class in struphy.models.fluid) EulerSPH.Propagators (class in struphy.models.fluid) eval_0form_spline_mpi() (in module struphy.bsplines.evaluation_kernels_3d) eval_1form_spline_mpi() (in module struphy.bsplines.evaluation_kernels_3d) eval_2form_spline_mpi() (in module struphy.bsplines.evaluation_kernels_3d) eval_3form() (struphy.feec.variational_utilities.InternalEnergyEvaluator method)

eval_3form_spline_mpi() (in module struphy.bsplines.evaluation_kernels_3d) eval_density() (struphy.pic.base.Particles method) eval_femfields() (in module struphy.post_processing.post_processing_tools) eval_field() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) eval_field_gradient() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) eval_fields() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) eval_fields_irregular_tensor_grid() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) eval_fields_regular_tensor_grid() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) eval_kernels (struphy.pic.pushing.pusher.Pusher property) (struphy.propagators.base.Propagator property) eval_quad() (struphy.feec.mass.WeightedMassOperator static method) eval_sph() (struphy.pic.base.Particles method) eval_spline_derivative_mpi_kernel() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi_2d() (in module struphy.bsplines.evaluation_kernels_2d) eval_spline_mpi_kernel() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi_markers() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi_matrix() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi_sparse_meshgrid() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi_tensor_product() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi_tensor_product_fast() (in module struphy.bsplines.evaluation_kernels_3d) eval_spline_mpi_tensor_product_fixed() (in module struphy.bsplines.evaluation_kernels_3d) eval_tp_fixed_loc() (struphy.feec.psydac_derham.SplineFunction method) eval_vectorfield_spline_mpi() (in module struphy.bsplines.evaluation_kernels_3d) evaluate() (in module struphy.bsplines.evaluation_kernels_1d) evaluate_2d() (in module struphy.bsplines.evaluation_kernels_2d) evaluate_3d() (in module struphy.bsplines.evaluation_kernels_3d) evaluate_discrete_d2e_drho2_grid() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) evaluate_discrete_d2e_ds2_grid() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) evaluate_discrete_de_drho_grid() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) evaluate_discrete_de_ds_grid() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) evaluate_e_field (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) evaluate_exact_de_drho_grid() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) evaluate_exact_de_ds_grid() (struphy.feec.variational_utilities.InternalEnergyEvaluator method) evaluate_matrix() (in module struphy.bsplines.evaluation_kernels_3d) evaluate_matrix_2d() (in module struphy.bsplines.evaluation_kernels_2d) evaluate_sparse() (in module struphy.bsplines.evaluation_kernels_3d) evaluate_sparse_2d() (in module struphy.bsplines.evaluation_kernels_2d) evaluate_tensor_product() (in module struphy.bsplines.evaluation_kernels_3d) evaluate_tensor_product_2d() (in module struphy.bsplines.evaluation_kernels_2d) evaluate_vector() (in module struphy.bsplines.evaluation_kernels_1d) evaluation_kernel_1d() (in module struphy.bsplines.evaluation_kernels_1d) evaluation_kernel_2d() (in module struphy.bsplines.evaluation_kernels_2d) evaluation_kernel_3d() (in module struphy.bsplines.evaluation_kernels_3d) exchange_assembly_data() (psydac.linalg.block.BlockLinearOperator method) (psydac.linalg.block.BlockVector method) (psydac.linalg.stencil.StencilVector method) (struphy.polar.basic.PolarVector method) export_fields() (psydac.fem.tensor.TensorFemSpace method) ExtendedMHDhomogenSlab (class in struphy.dispersion_relations.analytic) extract_coeffs() (struphy.feec.psydac_derham.SplineFunction method) extraction_ops (struphy.feec.psydac_derham.Derham property)

F

F (struphy.linear_algebra.saddle_point.SaddlePointSolver property) f (struphy.main.SimData property) (struphy.pic.utilities.BinningPlot property) f() (in module struphy.geometry.evaluation_kernels) f0 (struphy.pic.base.Particles property) f_coords (struphy.pic.base.Particles property) f_coords_index (struphy.pic.base.Particles property) f_init (struphy.pic.base.Particles property) f_jacobian_coords (struphy.pic.base.Particles property) f_jacobian_coords_index (struphy.pic.base.Particles property) FaradayExtended (class in struphy.propagators.propagators_fields) FEECVariable (class in struphy.models.variables) fem_space (struphy.feec.projectors.CommutingProjectorLocal property) (struphy.feec.psydac_derham.SplineFunction property) FFTSolver (class in struphy.feec.preconditioner) field_line_tracing() (in module struphy.geometry.utilities) field_species (struphy.models.base.StruphyModel property) FieldsBackground (class in struphy.io.options) FieldSpecies (class in struphy.models.species) file (struphy.io.output_handling.DataContainer property) file_name (struphy.io.output_handling.DataContainer property) filter_params (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Options attribute) (struphy.propagators.propagators_coupling.PressureCoupling6D.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute)

find_box() (in module struphy.pic.sorting_kernels) find_relative_col() (in module struphy.feec.basis_projection_ops) find_span() (in module struphy.bsplines.bsplines) (in module struphy.bsplines.bsplines_kernels) first_diagnostics_idx (struphy.pic.base.Particles property) first_free_idx (struphy.pic.base.Particles property) first_pusher_idx (struphy.pic.base.Particles property) first_shift_idx (struphy.pic.base.Particles property) flatten_index() (in module struphy.pic.sorting_kernels) fluid (struphy.propagators.propagators_markers.PushVinSPHpressure.Variables property) fluid_species (struphy.models.base.StruphyModel property) FluidEquilibrium (class in struphy.fields_background.base) FluidEquilibriumWithB (class in struphy.fields_background.base) FluidSlabITG (class in struphy.dispersion_relations.analytic) FluidSpecies (class in struphy.models.species) form (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) func (psydac.feec.global_projectors.GlobalProjector property)

G

g() (in module struphy.geometry.evaluation_kernels) G() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) (struphy.feec.mass.WeightedMassOperatorsOldForTesting method) g_inv() (in module struphy.geometry.evaluation_kernels) g_psi() (struphy.fields_background.equils.EQDSKequilibrium method) g_tor() (struphy.fields_background.base.AxisymmMHDequilibrium method) (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.CircularTokamak method) (struphy.fields_background.equils.EQDSKequilibrium method) gamma (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) gaussian() (struphy.kinetic_background.base.Maxwellian class method) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian method) gaussian_1d() (in module struphy.pic.sph_smoothing_kernels) gaussian_2d() (in module struphy.pic.sph_smoothing_kernels) gaussian_3d() (in module struphy.pic.sph_smoothing_kernels) gaussian_uni() (in module struphy.pic.sph_smoothing_kernels) gc_density_0form() (in module struphy.pic.accumulation.accum_kernels_gc) gc_mag_density_0form() (in module struphy.pic.accumulation.accum_kernels_gc) generate_default_parameter_file() (struphy.models.base.StruphyModel method) (struphy.models.fluid.EulerSPH method) (struphy.models.fluid.HasegawaWakatani method) (struphy.models.fluid.LinearExtendedMHDuniform method) (struphy.models.fluid.LinearMHD method) (struphy.models.fluid.ViscoResistiveDeltafMHD method) (struphy.models.fluid.ViscoResistiveDeltafMHD_with_q method) (struphy.models.fluid.ViscoResistiveLinearMHD method) (struphy.models.fluid.ViscoResistiveLinearMHD_with_q method) (struphy.models.fluid.ViscoResistiveMHD method) (struphy.models.fluid.ViscoResistiveMHD_with_p method) (struphy.models.fluid.ViscoResistiveMHD_with_q method) (struphy.models.fluid.ViscousFluid method) (struphy.models.hybrid.ColdPlasmaVlasov method) (struphy.models.hybrid.LinearMHDDriftkineticCC method) (struphy.models.hybrid.LinearMHDVlasovCC method) (struphy.models.hybrid.LinearMHDVlasovPC method) (struphy.models.kinetic.DriftKineticElectrostaticAdiabatic method) (struphy.models.kinetic.LinearVlasovAmpereOneSpecies method) (struphy.models.kinetic.VlasovAmpereOneSpecies method) (struphy.models.kinetic.VlasovMaxwellOneSpecies method) (struphy.models.toy.Poisson method) (struphy.models.toy.PressureLessSPH method) (struphy.models.toy.TwoFluidQuasiNeutralToy method) (struphy.models.toy.VariationalBarotropicFluid method) (struphy.models.toy.VariationalCompressibleFluid method) (struphy.models.toy.VariationalPressurelessFluid method) GenericCartesianFluidEquilibrium (class in struphy.fields_background.generic) GenericCartesianFluidEquilibriumWithB (class in struphy.fields_background.generic) geom_weights (struphy.feec.projectors.L2Projector property) get_are_zero() (struphy.feec.projectors.CommutingProjectorLocal method) get_assembly_grids() (psydac.fem.tensor.TensorFemSpace method) get_cprofile_data() (in module struphy.post_processing.cprofile_analyser) get_destinations_box() (struphy.pic.base.Particles method) get_dofs() (struphy.feec.projectors.CommutingProjector method) (struphy.feec.projectors.CommutingProjectorLocal method) (struphy.feec.projectors.L2Projector method) get_dofs_weighted() (struphy.feec.projectors.CommutingProjectorLocal method) get_electron_thermal_energy() (in module struphy.pic.utilities) get_kinetic_energy_particles() (in module struphy.pic.utilities) get_mhd_continua_2d() (in module struphy.diagnostics.continuous_spectra) get_next_index() (in module struphy.pic.sorting_kernels) get_params_numpy() (struphy.geometry.base.Domain method) get_params_of_run() (in module struphy.post_processing.post_processing_tools) get_pts_and_wts() (in module struphy.feec.psydac_derham) get_pts_and_wts_quasi() (in module struphy.feec.psydac_derham) get_quad_grids() (struphy.feec.psydac_derham.Derham method) get_refined_space() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) get_rowends() (struphy.feec.projectors.CommutingProjectorLocal method) get_rowstarts() (struphy.feec.projectors.CommutingProjectorLocal method) get_slices_grids_directions_and_df_data() (in module struphy.diagnostics.diagn_tools) get_span_and_basis() (in module struphy.feec.psydac_derham) get_spans() (in module struphy.bsplines.evaluation_kernels_3d) get_success() (psydac.linalg.solvers.LSMR method) get_tiles() (struphy.pic.base.Tesselation method) get_translation_b() (struphy.feec.projectors.CommutingProjectorLocal method) get_u2_grid() (struphy.feec.variational_utilities.KineticEnergyEvaluator method) get_values() (struphy.feec.projectors.CommutingProjectorLocal method)

get_weights_local_projector() (in module struphy.feec.psydac_derham) ghost_particles (struphy.pic.base.Particles property) ghost_regions_in_sync (psydac.linalg.block.BlockLinearOperator property) (psydac.linalg.block.BlockVector property) (psydac.linalg.stencil.StencilVector property) (struphy.polar.basic.PolarVector property) Ginv() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) (struphy.feec.mass.WeightedMassOperatorsOldForTesting method) global_element_ends (psydac.fem.tensor.TensorFemSpace property) global_element_starts (psydac.fem.tensor.TensorFemSpace property) GlobalProjector (class in psydac.feec.global_projectors) GMRES (class in psydac.linalg.solvers) grad (struphy.feec.psydac_derham.Derham property) grad_bcfree (struphy.feec.psydac_derham.Derham property) grad_driftkinetic_hamiltonian() (in module struphy.pic.pushing.eval_kernels_gc) grad_e3 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) grad_gaussian_1d() (in module struphy.pic.sph_smoothing_kernels) grad_gaussian_2d_1() (in module struphy.pic.sph_smoothing_kernels) grad_gaussian_2d_2() (in module struphy.pic.sph_smoothing_kernels) grad_gaussian_3d_1() (in module struphy.pic.sph_smoothing_kernels) grad_gaussian_3d_2() (in module struphy.pic.sph_smoothing_kernels) grad_gaussian_3d_3() (in module struphy.pic.sph_smoothing_kernels) grad_gaussian_uni() (in module struphy.pic.sph_smoothing_kernels) grad_linear_1d() (in module struphy.pic.sph_smoothing_kernels) grad_linear_2d_1() (in module struphy.pic.sph_smoothing_kernels) grad_linear_2d_2() (in module struphy.pic.sph_smoothing_kernels) grad_linear_3d_1() (in module struphy.pic.sph_smoothing_kernels) grad_linear_3d_2() (in module struphy.pic.sph_smoothing_kernels) grad_linear_3d_3() (in module struphy.pic.sph_smoothing_kernels) grad_linear_isotropic_3d_1() (in module struphy.pic.sph_smoothing_kernels) grad_linear_isotropic_3d_2() (in module struphy.pic.sph_smoothing_kernels) grad_linear_isotropic_3d_3() (in module struphy.pic.sph_smoothing_kernels) grad_linear_uni() (in module struphy.pic.sph_smoothing_kernels) grad_pol_to_pol (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) grad_pol_to_ten (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) grad_trigonometric_1d() (in module struphy.pic.sph_smoothing_kernels) grad_trigonometric_2d_1() (in module struphy.pic.sph_smoothing_kernels) grad_trigonometric_2d_2() (in module struphy.pic.sph_smoothing_kernels) grad_trigonometric_3d_1() (in module struphy.pic.sph_smoothing_kernels) grad_trigonometric_3d_2() (in module struphy.pic.sph_smoothing_kernels) grad_trigonometric_3d_3() (in module struphy.pic.sph_smoothing_kernels) grad_trigonometric_uni() (in module struphy.pic.sph_smoothing_kernels) gradB1 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] gradB1() (struphy.fields_background.base.FluidEquilibriumWithB method) (struphy.fields_background.base.LogicalFluidEquilibriumWithB method) (struphy.fields_background.base.LogicalMHDequilibrium method) (struphy.fields_background.equils.DESCequilibrium method) (struphy.fields_background.equils.GVECequilibrium method) gradB1_1() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB1_2() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB1_3() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB2 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] gradB2() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB2_1() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB2_2() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB2_3() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB_cart() (struphy.fields_background.base.FluidEquilibriumWithB method) gradB_xyz() (struphy.fields_background.base.AxisymmMHDequilibrium method) (struphy.fields_background.base.CartesianFluidEquilibriumWithB method) (struphy.fields_background.base.CartesianMHDequilibrium method) (struphy.fields_background.equils.CurrentSheet method) (struphy.fields_background.equils.HomogenSlab method) (struphy.fields_background.equils.HomogenSlabITG method) (struphy.fields_background.equils.ScrewPinch method) (struphy.fields_background.equils.ShearedSlab method) (struphy.fields_background.equils.ShearFluid method) (struphy.fields_background.generic.GenericCartesianFluidEquilibriumWithB method) gradBv (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] gradBv() (struphy.fields_background.base.FluidEquilibriumWithB method) gradBv_1() (struphy.fields_background.base.FluidEquilibriumWithB method) gradBv_2() (struphy.fields_background.base.FluidEquilibriumWithB method) gradBv_3() (struphy.fields_background.base.FluidEquilibriumWithB method) gravity (struphy.propagators.propagators_markers.PushVinSPHpressure.Options attribute) greville() (in module struphy.bsplines.bsplines) grid_w (psydac.feec.global_projectors.GlobalProjector property) grid_x (psydac.feec.global_projectors.GlobalProjector property) GuidingCenter (class in struphy.models.toy) GuidingCenter.KineticIons (class in struphy.models.toy) GuidingCenter.Propagators (class in struphy.models.toy) GVECequilibrium (class in struphy.fields_background.equils) GVECunit (class in struphy.geometry.domains) gyro_transfer() (struphy.pic.base.Particles method) GyroMaxwellian2D (class in struphy.kinetic_background.maxwellians)

H

H (psydac.linalg.basic.LinearOperator property) H1vecMassMatrix_density (class in struphy.feec.variational_utilities) Hall (class in struphy.propagators.propagators_fields) Hall.Options (class in struphy.propagators.propagators_fields) Hall.Variables (class in struphy.propagators.propagators_fields) HasegawaWakatani (class in struphy.models.fluid) (class in struphy.propagators.propagators_fields) HasegawaWakatani.EMFields (class in struphy.models.fluid) HasegawaWakatani.Options (class in struphy.propagators.propagators_fields) HasegawaWakatani.Plasma (class in struphy.models.fluid) HasegawaWakatani.Propagators (class in struphy.models.fluid) HasegawaWakatani.Variables (class in struphy.propagators.propagators_fields) Hdiv0_transport_operator (class in struphy.feec.variational_utilities)

hfun (struphy.propagators.propagators_fields.TimeDependentSource.Options attribute) histopolation_matrix() (in module struphy.bsplines.bsplines) holes (struphy.pic.base.Particles property) hollow_cyl() (in module struphy.geometry.mappings_kernels) hollow_cyl_df() (in module struphy.geometry.mappings_kernels) hollow_torus() (in module struphy.geometry.mappings_kernels) hollow_torus_df() (in module struphy.geometry.mappings_kernels) HollowCylinder (class in struphy.geometry.domains) HollowTorus (class in struphy.geometry.domains) HomogenSlab (class in struphy.fields_background.equils) HomogenSlabITG (class in struphy.fields_background.equils) hybrid_fA_Arelated() (in module struphy.pic.accumulation.accum_kernels) hybrid_fA_density() (in module struphy.pic.accumulation.accum_kernels)

I

I (struphy.feec.projectors.CommutingProjector property) I0 (struphy.feec.projectors.CommutingProjector property) I0T (struphy.feec.projectors.CommutingProjector property) i4_bit_hi1() (in module struphy.pic.sobol_seq) i4_bit_lo0() (in module struphy.pic.sobol_seq) i4_sobol() (in module struphy.pic.sobol_seq) i4_sobol_generate() (in module struphy.pic.sobol_seq) i4_uniform() (in module struphy.pic.sobol_seq) idot() (psydac.linalg.basic.LinearOperator method) (struphy.feec.basis_projection_ops.CoordinateInclusion method) (struphy.feec.basis_projection_ops.CoordinateProjector method) IGAPolarCylinder (class in struphy.geometry.domains) IGAPolarTorus (class in struphy.geometry.domains) imat_kronecker (psydac.feec.global_projectors.GlobalProjector property) ImplicitDiffusion (class in struphy.propagators.propagators_fields) ImplicitDiffusion.Options (class in struphy.propagators.propagators_fields) ImplicitDiffusion.Variables (class in struphy.propagators.propagators_fields) import_fields() (psydac.fem.tensor.TensorFemSpace method) import_parameters_py() (in module struphy.io.setup) indD (struphy.feec.psydac_derham.Derham property) index (struphy.pic.base.Particles property) index_array (struphy.feec.psydac_derham.Derham property) index_array_D (struphy.feec.psydac_derham.Derham property) index_array_N (struphy.feec.psydac_derham.Derham property) indN (struphy.feec.psydac_derham.Derham property) (struphy.geometry.base.Domain property) info() (struphy.io.output_handling.DataContainer method) init_control_variate() (struphy.pic.accumulation.particles_to_grid.Accumulator method) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector method) init_derham() (struphy.feec.psydac_derham.Derham method) init_histopolation() (psydac.fem.tensor.TensorFemSpace method) init_interpolation() (psydac.fem.tensor.TensorFemSpace method) init_kernels (struphy.pic.pushing.pusher.Pusher property) (struphy.propagators.base.Propagator property) InitFromOutput (class in struphy.initial.utilities) initial_condition (struphy.pic.base.Particles property) initialize_coeffs() (struphy.feec.psydac_derham.SplineFunction method) initialize_coeffs_from_restart_file() (struphy.feec.psydac_derham.SplineFunction method)

initialize_data_output() (struphy.models.base.StruphyModel method) initialize_from_restart() (struphy.models.base.StruphyModel method) initialize_neighbours() (in module struphy.pic.sorting_kernels) initialize_weights() (struphy.pic.base.Particles method) inner() (struphy.polar.basic.PolarDerhamSpace method) integral() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) integrate() (struphy.models.base.StruphyModel method) interfaces (psydac.fem.tensor.TensorFemSpace property) InternalEnergyEvaluator (class in struphy.feec.variational_utilities) interp_mapping() (in module struphy.geometry.base) inv (struphy.feec.mass.WeightedMassOperators.H1vecMassMatrix_density property) (struphy.feec.variational_utilities.H1vecMassMatrix_density property) inverse() (in module psydac.linalg.solvers) inverse_map() (struphy.fields_background.base.AxisymmMHDequilibrium static method) (struphy.geometry.domains.HollowTorus method) ions (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Variables property) (struphy.propagators.propagators_coupling.EfieldWeights.Variables property) (struphy.propagators.propagators_coupling.VlasovAmpere.Variables property) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Variables property) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Variables property) (struphy.propagators.propagators_markers.PushVxB.Variables property) is_circulant() (in module struphy.feec.preconditioner) is_domain_boundary (struphy.pic.base.Particles.SortingBoxes property) is_multipatch (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) is_polar (struphy.feec.projectors.CommutingProjector property) (struphy.kinetic_background.base.KineticBackground property) (struphy.kinetic_background.base.ScalarMultiplyKineticBackground property) (struphy.kinetic_background.base.SumKineticBackground property) (struphy.kinetic_background.maxwellians.ColdPlasma property) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D property) (struphy.kinetic_background.maxwellians.Maxwellian3D property) is_prime() (in module struphy.pic.sobol_seq) is_vector_valued (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) is_volume_form (struphy.pic.base.Particles property) IT (struphy.feec.projectors.CommutingProjector property) ITPA_density (class in struphy.initial.perturbations), [1]

J

j (struphy.io.options.Units property) (struphy.propagators.propagators_fields.JxBCold.Variables property) (struphy.propagators.propagators_fields.OhmCold.Variables property) j1 (struphy.fields_background.projected_equils.ProjectedMHDequilibrium property), [1] j1() (struphy.fields_background.base.MHDequilibrium method) j1_1() (struphy.fields_background.base.MHDequilibrium method) j1_2() (struphy.fields_background.base.MHDequilibrium method) j1_3() (struphy.fields_background.base.MHDequilibrium method) j2 (struphy.fields_background.projected_equils.ProjectedMHDequilibrium property), [1] j2() (struphy.fields_background.base.MHDequilibrium method) j2_1() (struphy.fields_background.base.MHDequilibrium method) j2_2() (struphy.fields_background.base.MHDequilibrium method) j2_3() (struphy.fields_background.base.MHDequilibrium method) j_cart() (struphy.fields_background.base.MHDequilibrium method) j_xyz() (struphy.fields_background.base.AxisymmMHDequilibrium method) (struphy.fields_background.base.CartesianMHDequilibrium method) (struphy.fields_background.equils.CurrentSheet method) (struphy.fields_background.equils.HomogenSlab method) (struphy.fields_background.equils.ScrewPinch method) (struphy.fields_background.equils.ShearedSlab method) (struphy.fields_background.equils.ShearFluid method)

jacobian() (struphy.geometry.base.Domain method) jacobian_det() (struphy.geometry.base.Domain method) jacobian_inv() (struphy.geometry.base.Domain method) jv (struphy.fields_background.projected_equils.ProjectedMHDequilibrium property), [1] jv() (struphy.fields_background.base.LogicalMHDequilibrium method) (struphy.fields_background.base.MHDequilibrium method) (struphy.fields_background.equils.DESCequilibrium method) (struphy.fields_background.equils.GVECequilibrium method) jv_1() (struphy.fields_background.base.MHDequilibrium method) jv_2() (struphy.fields_background.base.MHDequilibrium method) jv_3() (struphy.fields_background.base.MHDequilibrium method) JxBCold (class in struphy.propagators.propagators_fields) JxBCold.Options (class in struphy.propagators.propagators_fields) JxBCold.Variables (class in struphy.propagators.propagators_fields)

K

k (struphy.ode.solvers.ODEsolverFEEC property) K0 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) K3 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) k_crit (struphy.dispersion_relations.base.DispersionRelations1D property) kappa (struphy.propagators.propagators_coupling.EfieldWeights.Options attribute) (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) kBT (struphy.io.options.Units property) ker_dct() (struphy.pic.base.Particles class method) kernel (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) (struphy.pic.pushing.pusher.Pusher property) kernel_evaluate() (in module struphy.geometry.evaluation_kernels) kernel_evaluate_pic() (in module struphy.geometry.evaluation_kernels) kernel_pullpush() (in module struphy.geometry.transform_kernels) kernel_pullpush_pic() (in module struphy.geometry.transform_kernels) kernel_type (struphy.propagators.propagators_markers.PushVinSPHpressure.Options attribute) kernel_width (struphy.propagators.propagators_markers.PushVinSPHpressure.Options attribute) KernelDensityPlot (class in struphy.pic.utilities), [1] kind_map (struphy.geometry.base.Domain property)

kinds (struphy.pic.base.Particles property) KineticBackground (class in struphy.kinetic_background.base) KineticEnergyEvaluator (class in struphy.feec.variational_utilities) knots (psydac.fem.tensor.TensorFemSpace property) kron_fftsolve_2d() (in module struphy.linear_algebra.linalg_kron) kron_fftsolve_3d() (in module struphy.linear_algebra.linalg_kron) kron_lusolve_2d() (in module struphy.linear_algebra.linalg_kron) kron_lusolve_3d() (in module struphy.linear_algebra.linalg_kron) kron_matmat_fft_3d() (in module struphy.linear_algebra.linalg_kron) kron_matvec_2d() (in module struphy.linear_algebra.linalg_kron) kron_matvec_3d() (in module struphy.linear_algebra.linalg_kron) kron_matvec_3d_1() (in module struphy.linear_algebra.linalg_kron) kron_matvec_3d_12() (in module struphy.linear_algebra.linalg_kron) kron_matvec_3d_13() (in module struphy.linear_algebra.linalg_kron) kron_matvec_3d_2() (in module struphy.linear_algebra.linalg_kron) kron_matvec_3d_23() (in module struphy.linear_algebra.linalg_kron) kron_matvec_3d_3() (in module struphy.linear_algebra.linalg_kron) kron_solve_3d() (in module struphy.linear_algebra.linalg_kron) kwargs (struphy.models.base.StruphyModel property)

L

L2_transport_operator (class in struphy.feec.variational_utilities) L2Projector (class in struphy.feec.projectors) ldim (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) lifting (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) limiter_pts_R (struphy.fields_background.equils.EQDSKequilibrium property) limiter_pts_Z (struphy.fields_background.equils.EQDSKequilibrium property) linear_1d() (in module struphy.pic.sph_smoothing_kernels) linear_2d() (in module struphy.pic.sph_smoothing_kernels) linear_3d() (in module struphy.pic.sph_smoothing_kernels) linear_isotropic_3d() (in module struphy.pic.sph_smoothing_kernels) linear_uni() (in module struphy.pic.sph_smoothing_kernels) linear_vlasov_ampere() (in module struphy.pic.accumulation.accum_kernels) LinearExtendedMHDuniform (class in struphy.models.fluid) LinearExtendedMHDuniform.EMFields (class in struphy.models.fluid) LinearExtendedMHDuniform.MHD (class in struphy.models.fluid) LinearExtendedMHDuniform.Propagators (class in struphy.models.fluid) linearize_current (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) LinearMHD (class in struphy.models.fluid) LinearMHD.EMFields (class in struphy.models.fluid) LinearMHD.MHD (class in struphy.models.fluid) LinearMHD.Propagators (class in struphy.models.fluid) LinearMHDDriftkineticCC (class in struphy.models.hybrid) LinearMHDDriftkineticCC.EMFields (class in struphy.models.hybrid) LinearMHDDriftkineticCC.EnergeticIons (class in struphy.models.hybrid) LinearMHDDriftkineticCC.MHD (class in struphy.models.hybrid) LinearMHDDriftkineticCC.Propagators (class in struphy.models.hybrid) LinearMHDVlasovCC (class in struphy.models.hybrid)

LinearMHDVlasovCC.EMFields (class in struphy.models.hybrid) LinearMHDVlasovCC.EnergeticIons (class in struphy.models.hybrid) LinearMHDVlasovCC.MHD (class in struphy.models.hybrid) LinearMHDVlasovCC.Propagators (class in struphy.models.hybrid) LinearMHDVlasovPC (class in struphy.models.hybrid) LinearMHDVlasovPC.EMFields (class in struphy.models.hybrid) LinearMHDVlasovPC.EnergeticIons (class in struphy.models.hybrid) LinearMHDVlasovPC.MHD (class in struphy.models.hybrid) LinearMHDVlasovPC.Propagators (class in struphy.models.hybrid) LinearOperator (class in psydac.linalg.basic) LinearVlasovAmpereOneSpecies (class in struphy.models.kinetic) LinearVlasovAmpereOneSpecies.EMFields (class in struphy.models.kinetic) LinearVlasovAmpereOneSpecies.KineticIons (class in struphy.models.kinetic) LinearVlasovAmpereOneSpecies.Propagators (class in struphy.models.kinetic) LinearVlasovMaxwellOneSpecies (class in struphy.models.kinetic) LinearVlasovMaxwellOneSpecies.EMFields (class in struphy.models.kinetic) LinearVlasovMaxwellOneSpecies.KineticIons (class in struphy.models.kinetic) LinearVlasovMaxwellOneSpecies.Propagators (class in struphy.models.kinetic) LinOpWithTransp (class in struphy.feec.linear_operators) load_data() (in module struphy.main) loading (struphy.pic.base.Particles property) loading_params (struphy.pic.base.Particles property) LoadingParameters (class in struphy.pic.utilities), [1] local_domain (psydac.fem.tensor.TensorFemSpace property) LogicalFluidEquilibrium (class in struphy.fields_background.base) LogicalFluidEquilibriumWithB (class in struphy.fields_background.base) LogicalMHDequilibrium (class in struphy.fields_background.base) lost_markers (struphy.pic.base.Particles property) LSMR (class in psydac.linalg.solvers)

M

M (struphy.feec.mass.WeightedMassOperator property) M0 (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M0ad (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M1 (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M1Bninv (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M1gyro (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M1J (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M1n (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M1ninv (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M1perp (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M2 (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M2B (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M2B_div0 (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M2Bn (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M2J (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M2n (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M3 (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) M_un (struphy.feec.variational_utilities.KineticEnergyEvaluator property) M_un1 (struphy.feec.variational_utilities.KineticEnergyEvaluator property) magn_bckgr (struphy.pic.particles.Particles5D property) Magnetosonic (class in struphy.propagators.propagators_fields) Magnetosonic.Options (class in struphy.propagators.propagators_fields) Magnetosonic.Variables (class in struphy.propagators.propagators_fields) MagnetosonicUniform (class in struphy.propagators.propagators_fields) MagnetosonicUniform.Options (class in struphy.propagators.propagators_fields) MagnetosonicUniform.Variables (class in struphy.propagators.propagators_fields) make_knots() (in module struphy.bsplines.bsplines) ManufacturedSolutionPotential (class in struphy.initial.perturbations), [1] ManufacturedSolutionVelocity (class in struphy.initial.perturbations), [1] ManufacturedSolutionVelocity_2 (class in struphy.initial.perturbations), [1] mapping (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) marker_ids (struphy.pic.base.Particles property) markers (struphy.pic.base.Particles property) markers_wo_holes (struphy.pic.base.Particles property) markers_wo_holes_and_ghost (struphy.pic.base.Particles property) mass_ops (struphy.feec.projectors.L2Projector property) (struphy.models.base.StruphyModel property) (struphy.propagators.base.Propagator property) MassMatrixDiagonalPreconditioner (class in struphy.feec.preconditioner) MassMatrixPreconditioner (class in struphy.feec.preconditioner) massop (struphy.feec.mass.WeightedMassOperators.H1vecMassMatrix_density property) (struphy.feec.variational_utilities.H1vecMassMatrix_density property) matrix (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner property) (struphy.feec.preconditioner.MassMatrixPreconditioner property) matrix_inv() (in module struphy.linear_algebra.linalg_kernels) matrix_inv_with_det() (in module struphy.linear_algebra.linalg_kernels) matrix_matrix() (in module struphy.linear_algebra.linalg_kernels) matrix_matrix4() (in module struphy.linear_algebra.linalg_kernels) matrix_vector() (in module struphy.linear_algebra.linalg_kernels) matrix_vector4() (in module struphy.linear_algebra.linalg_kernels) maxiter (struphy.pic.pushing.pusher.Pusher property) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) maxw_params (struphy.kinetic_background.base.Maxwellian property) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian property) (struphy.kinetic_background.maxwellians.ColdPlasma property) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D property) (struphy.kinetic_background.maxwellians.Maxwellian3D property) Maxwell (class in struphy.models.toy) (class in struphy.propagators.propagators_fields) Maxwell.EMFields (class in struphy.models.toy) Maxwell.Options (class in struphy.propagators.propagators_fields) Maxwell.Propagators (class in struphy.models.toy) Maxwell.Variables (class in struphy.propagators.propagators_fields) Maxwell1D (class in struphy.dispersion_relations.analytic) Maxwellian (class in struphy.kinetic_background.base) Maxwellian3D (class in struphy.kinetic_background.maxwellians) method_to_solve (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) metric() (struphy.geometry.base.Domain method) metric_inv() (struphy.geometry.base.Domain method) MhdContinousSpectraCylinder (class in struphy.dispersion_relations.analytic) MhdContinousSpectraShearedSlab (class in struphy.dispersion_relations.analytic) MHDequilibrium (class in struphy.fields_background.base) MHDhomogenSlab (class in struphy.dispersion_relations.analytic) MinimumResidual (class in psydac.linalg.solvers) Mmat (struphy.feec.projectors.L2Projector property) model (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute)

ModesCos (class in struphy.initial.perturbations), [1] ModesCosCos (class in struphy.initial.perturbations), [1] ModesCosSin (class in struphy.initial.perturbations), [1] ModesSin (class in struphy.initial.perturbations), [1] ModesSinCos (class in struphy.initial.perturbations), [1] ModesSinSin (class in struphy.initial.perturbations), [1] module psydac.linalg.solvers struphy.bsplines.bsplines struphy.bsplines.bsplines_kernels struphy.bsplines.evaluation_kernels_1d struphy.bsplines.evaluation_kernels_2d struphy.bsplines.evaluation_kernels_3d struphy.bsplines.shapefunc_kernels struphy.diagnostics.continuous_spectra struphy.diagnostics.diagn_tools struphy.dispersion_relations.analytic struphy.dispersion_relations.base struphy.feec.basis_projection_ops struphy.feec.linear_operators struphy.feec.mass struphy.feec.preconditioner struphy.feec.projectors struphy.feec.psydac_derham struphy.feec.utilities struphy.feec.variational_utilities struphy.fields_background.base struphy.fields_background.equils struphy.fields_background.generic struphy.fields_background.projected_equils, [1] struphy.geometry.base struphy.geometry.domains struphy.geometry.evaluation_kernels struphy.geometry.mappings_kernels struphy.geometry.transform_kernels struphy.geometry.utilities struphy.initial.perturbations, [1] struphy.initial.utilities struphy.io.output_handling struphy.io.setup struphy.kinetic_background.base struphy.kinetic_background.maxwellians struphy.linear_algebra.linalg_kernels struphy.linear_algebra.linalg_kron struphy.linear_algebra.saddle_point struphy.linear_algebra.schur_solver struphy.main struphy.models.base struphy.models.fluid struphy.models.hybrid struphy.models.kinetic struphy.models.toy struphy.ode.solvers struphy.ode.utils struphy.pic.accumulation.accum_kernels struphy.pic.accumulation.accum_kernels_gc struphy.pic.accumulation.filter_kernels struphy.pic.accumulation.particles_to_grid struphy.pic.base struphy.pic.particles struphy.pic.pushing.eval_kernels_gc struphy.pic.pushing.pusher_kernels struphy.pic.pushing.pusher_kernels_gc struphy.pic.sampling_kernels struphy.pic.sobol_seq struphy.pic.sorting_kernels struphy.pic.sph_eval_kernels struphy.pic.sph_smoothing_kernels struphy.pic.utilities struphy.polar.basic struphy.polar.extraction_operators struphy.polar.linear_operators struphy.post_processing.cprofile_analyser struphy.post_processing.orbits.orbits_kernels struphy.post_processing.orbits.orbits_tools struphy.post_processing.post_processing_tools struphy.propagators.base struphy.propagators.propagators_coupling struphy.propagators.propagators_fields struphy.propagators.propagators_markers moment_factors (struphy.kinetic_background.maxwellians.CanonicalMaxwellian property) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D property) (struphy.kinetic_background.maxwellians.Maxwellian3D property) mpi_comm (struphy.pic.base.Particles property) mpi_dims_mask (struphy.pic.base.Particles property) mpi_rank (struphy.pic.base.Particles property) mpi_size (struphy.pic.base.Particles property) mpi_sort (struphy.pic.pushing.pusher.Pusher property) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) mpi_sort_markers() (struphy.pic.base.Particles method) mu (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) mu_a (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) multiplicity (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) Mv (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) MvJ (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) Mvn (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property)

N

n (struphy.io.options.Units property) (struphy.polar.basic.PolarDerhamSpace property) (struphy.propagators.propagators_fields.HasegawaWakatani.Variables property) (struphy.propagators.propagators_fields.Magnetosonic.Variables property) (struphy.propagators.propagators_fields.MagnetosonicUniform.Variables property) n() (struphy.kinetic_background.base.KineticBackground method) (struphy.kinetic_background.base.ScalarMultiplyKineticBackground method) (struphy.kinetic_background.base.SumKineticBackground method) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian method) (struphy.kinetic_background.maxwellians.ColdPlasma method) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D method) (struphy.kinetic_background.maxwellians.Maxwellian3D method) n0 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) n0() (struphy.fields_background.base.FluidEquilibrium method) (struphy.fields_background.base.LogicalFluidEquilibrium method) (struphy.fields_background.base.LogicalMHDequilibrium method) (struphy.fields_background.equils.DESCequilibrium method) (struphy.fields_background.equils.GVECequilibrium method) n1 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) n2 (struphy.polar.basic.PolarDerhamSpace property) (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) n3 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] (struphy.polar.basic.PolarDerhamSpace property) n3() (struphy.fields_background.base.FluidEquilibrium method) n_block_cols (psydac.linalg.block.BlockLinearOperator property) n_block_rows (psydac.linalg.block.BlockLinearOperator property) n_blocks (psydac.linalg.block.BlockVector property) n_cols (struphy.pic.base.Particles property) n_cols_aux (struphy.pic.base.Particles property) (struphy.pic.particles.Particles3D property) (struphy.pic.particles.Particles5D property) (struphy.pic.particles.Particles6D property) (struphy.pic.particles.ParticlesSPH property) n_cols_diagnostics (struphy.pic.base.Particles property) (struphy.pic.particles.Particles3D property) (struphy.pic.particles.Particles5D property) (struphy.pic.particles.Particles6D property) (struphy.pic.particles.ParticlesSPH property) n_cols_pusher (struphy.pic.base.Particles property) n_cols_shift (struphy.pic.base.Particles property) n_comps (struphy.polar.basic.PolarDerhamSpace property) n_lost_markers (struphy.pic.base.Particles property) n_mks_global (struphy.pic.base.Particles property) n_mks_load (struphy.pic.base.Particles property) n_mks_loc (struphy.pic.base.Particles property) n_mks_on_clone (struphy.pic.base.Particles property) n_mks_on_each_clone (struphy.pic.base.Particles property) n_mks_on_each_proc (struphy.pic.base.Particles property) n_polar (struphy.polar.basic.PolarDerhamSpace property) (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) n_psi() (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.EQDSKequilibrium method) n_r() (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.ScrewPinch method) n_rings (struphy.polar.basic.PolarDerhamSpace property) (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) n_rows (struphy.pic.base.Particles property) n_sph (struphy.main.SimData property) (struphy.pic.utilities.KernelDensityPlot property) n_stages (struphy.ode.utils.ButcherTableau property) (struphy.pic.pushing.pusher.Pusher property) n_tiles (struphy.pic.base.Tesselation property) n_x() (struphy.fields_background.equils.ShearedSlab method) n_xyz() (struphy.fields_background.base.AxisymmMHDequilibrium method) (struphy.fields_background.base.CartesianFluidEquilibrium method) (struphy.fields_background.base.CartesianMHDequilibrium method) (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.CircularTokamak method) (struphy.fields_background.equils.ConstantVelocity method) (struphy.fields_background.equils.CurrentSheet method) (struphy.fields_background.equils.EQDSKequilibrium method) (struphy.fields_background.equils.HomogenSlab method) (struphy.fields_background.equils.HomogenSlabITG method) (struphy.fields_background.equils.ScrewPinch method) (struphy.fields_background.equils.ShearedSlab method) (struphy.fields_background.equils.ShearFluid method) (struphy.fields_background.generic.GenericCartesianFluidEquilibrium method)

n_z() (struphy.fields_background.equils.ShearFluid method) naive_evaluation_flat() (in module struphy.pic.sph_eval_kernels) naive_evaluation_kernel() (in module struphy.pic.sph_eval_kernels) naive_evaluation_meshgrid() (in module struphy.pic.sph_eval_kernels) name (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.psydac_derham.SplineFunction property) (struphy.pic.base.Particles property) Nattr (struphy.main.SimData property) NbaseN (struphy.geometry.base.Domain property) nbasis (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) (struphy.feec.psydac_derham.Derham property) (struphy.feec.psydac_derham.SplineFunction property) nbranches (struphy.dispersion_relations.base.ContinuousSpectra1D property) ncells (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) neighbours (struphy.feec.psydac_derham.Derham property) (struphy.pic.base.Particles.SortingBoxes property) Nel (struphy.feec.psydac_derham.Derham property) (struphy.geometry.base.Domain property) Noise (class in struphy.initial.perturbations), [1] (class in struphy.initial.utilities) nonlin_solver (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMomentumAdvection.Options attribute) (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) nonlinear (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) nonzero_block_indices (psydac.linalg.block.BlockLinearOperator property) Np (struphy.main.SimData property) (struphy.pic.base.Particles property) Np_per_clone (struphy.pic.base.Particles property) nprocs (struphy.pic.base.Particles property) nq_pr (struphy.feec.psydac_derham.Derham property) nquads (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.psydac_derham.Derham property) Nt (struphy.main.SimData property) nt_per_dim (struphy.pic.base.Tesselation property) nu (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) nu_e (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) num_clones (struphy.pic.base.Particles property) numerical_domain (struphy.fields_background.base.NumericalFluidEquilibrium property) (struphy.fields_background.base.NumericalFluidEquilibriumWithB property) (struphy.fields_background.base.NumericalMHDequilibrium property) (struphy.fields_background.equils.DESCequilibrium property) (struphy.fields_background.equils.GVECequilibrium property) NumericalFluidEquilibrium (class in struphy.fields_background.base) NumericalFluidEquilibriumWithB (class in struphy.fields_background.base) NumericalMHDequilibrium (class in struphy.fields_background.base) nx (struphy.pic.base.Particles.SortingBoxes property) ny (struphy.pic.base.Particles.SortingBoxes property) nz (struphy.pic.base.Particles.SortingBoxes property)

O

ODEsolverFEEC (class in struphy.ode.solvers) OhmCold (class in struphy.propagators.propagators_fields) OhmCold.Options (class in struphy.propagators.propagators_fields) OhmCold.Variables (class in struphy.propagators.propagators_fields) omega (struphy.propagators.propagators_fields.HasegawaWakatani.Variables property) (struphy.propagators.propagators_fields.TimeDependentSource.Options attribute) operators (struphy.pic.accumulation.particles_to_grid.Accumulator property) opt1 (struphy.propagators.base.Propagator.Options attribute) options (struphy.propagators.base.Propagator property) options() (struphy.models.base.StruphyModel class method) OptsAlgo (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_fields.Maxwell.Options attribute) (struphy.propagators.propagators_fields.ShearAlfven.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) (struphy.propagators.propagators_markers.PushVinSPHpressure.Options attribute) (struphy.propagators.propagators_markers.PushVxB.Options attribute) OptsCfun (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute)

OptsDiffusionMat (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) OptsDimension (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) OptsModel (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) OptsStabMat (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute) OptsTemplate (struphy.propagators.base.Propagator.Options attribute) OptsThermo (struphy.propagators.propagators_markers.PushVinSPHpressure.Options attribute) OptsTimeSource (struphy.propagators.propagators_fields.TimeDependentSource.Options attribute) orbits (struphy.main.SimData property) Orthogonal (class in struphy.geometry.domains) orthogonal() (in module struphy.geometry.mappings_kernels) orthogonal_df() (in module struphy.geometry.mappings_kernels) outer() (in module struphy.linear_algebra.linalg_kernels)

P

P (struphy.feec.psydac_derham.Derham property) p (struphy.feec.psydac_derham.Derham property) (struphy.geometry.base.Domain property) (struphy.io.options.Units property) (struphy.propagators.propagators_fields.Magnetosonic.Variables property) (struphy.propagators.propagators_fields.MagnetosonicUniform.Variables property) (struphy.propagators.propagators_fields.VariationalPBEvolve.Variables property) p0 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] p0() (struphy.fields_background.base.FluidEquilibrium method) (struphy.fields_background.base.LogicalFluidEquilibrium method) (struphy.fields_background.base.LogicalMHDequilibrium method) (struphy.fields_background.equils.DESCequilibrium method) (struphy.fields_background.equils.GVECequilibrium method) p3 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] p3() (struphy.fields_background.base.FluidEquilibrium method) p_psi() (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.EQDSKequilibrium method) p_r() (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.ScrewPinch method) p_ten_to_pol (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) p_ten_to_ten (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) p_x() (struphy.fields_background.equils.ShearedSlab method) p_xyz() (struphy.fields_background.base.AxisymmMHDequilibrium method) (struphy.fields_background.base.CartesianFluidEquilibrium method) (struphy.fields_background.base.CartesianMHDequilibrium method) (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.CircularTokamak method) (struphy.fields_background.equils.ConstantVelocity method) (struphy.fields_background.equils.CurrentSheet method) (struphy.fields_background.equils.EQDSKequilibrium method) (struphy.fields_background.equils.HomogenSlab method) (struphy.fields_background.equils.HomogenSlabITG method) (struphy.fields_background.equils.ScrewPinch method) (struphy.fields_background.equils.ShearedSlab method) (struphy.fields_background.equils.ShearFluid method) (struphy.fields_background.generic.GenericCartesianFluidEquilibrium method) p_z() (struphy.fields_background.equils.ShearFluid method) pads (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) (psydac.linalg.stencil.StencilVector property) (struphy.feec.psydac_derham.SplineFunction property) parallel (struphy.polar.basic.PolarDerhamSpace property) params (struphy.dispersion_relations.base.ContinuousSpectra1D property) (struphy.dispersion_relations.base.DispersionRelations1D property) (struphy.feec.projectors.L2Projector property) (struphy.fields_background.base.FluidEquilibrium property) (struphy.geometry.base.Domain property) (struphy.models.base.StruphyModel property) params_numpy (struphy.geometry.base.Domain property) ParamsIn (class in struphy.post_processing.post_processing_tools) parent_space (struphy.polar.basic.PolarDerhamSpace property) particle_refilling() (struphy.pic.base.Particles method) particle_species (struphy.models.base.StruphyModel property) Particles (class in struphy.pic.base) particles (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) (struphy.pic.pushing.pusher.Pusher property) Particles.SortingBoxes (class in struphy.pic.base) Particles3D (class in struphy.pic.particles) Particles5D (class in struphy.pic.particles) Particles6D (class in struphy.pic.particles) ParticleSpecies (class in struphy.models.species) ParticlesSPH (class in struphy.pic.particles) patch_spaces (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) PB (struphy.feec.basis_projection_ops.BasisProjectionOperators property) PBiConjugateGradientStabilized (class in psydac.linalg.solvers) pc (struphy.feec.projectors.CommutingProjector property) pc0 (struphy.feec.projectors.CommutingProjector property) pc0T (struphy.feec.projectors.CommutingProjector property) pc_lin_mhd_6d() (in module struphy.pic.accumulation.accum_kernels) pc_lin_mhd_6d_full() (in module struphy.pic.accumulation.accum_kernels) PConjugateGradient (class in psydac.linalg.solvers) pcT (struphy.feec.projectors.CommutingProjector property) periodic (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) periodic_eta3 (struphy.geometry.base.Domain property) Perturbation (class in struphy.initial.base) perturbations (struphy.feec.psydac_derham.SplineFunction property) (struphy.pic.base.Particles property) phasespace_coords (struphy.pic.base.Particles property) phi (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) (struphy.propagators.propagators_fields.ImplicitDiffusion.Variables property) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Variables property) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) (struphy.propagators.propagators_markers.PushVinEfield.Options attribute) PICVariable (class in struphy.models.variables) piecewise() (in module struphy.bsplines.bsplines_kernels) (in module struphy.bsplines.shapefunc_kernels) piecewise_der() (in module struphy.bsplines.bsplines_kernels) (in module struphy.bsplines.shapefunc_kernels) plot() (struphy.dispersion_relations.base.DispersionRelations1D method) plot_2d_decomposition() (psydac.fem.tensor.TensorFemSpace method) plot_distr_fun() (in module struphy.diagnostics.diagn_tools) plot_profiles() (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.CurrentSheet method) (struphy.fields_background.equils.ScrewPinch method) (struphy.fields_background.equils.ShearedSlab method) (struphy.fields_background.equils.ShearFluid method) plot_pts (struphy.pic.utilities.KernelDensityPlot property) plot_scalars() (in module struphy.diagnostics.diagn_tools) plots_2d_overview() (in module struphy.diagnostics.diagn_tools) plots_2d_video() (in module struphy.diagnostics.diagn_tools) plots_videos_2d() (in module struphy.diagnostics.diagn_tools) Poisson (class in struphy.models.toy) (class in struphy.propagators.propagators_fields) Poisson.EMFields (class in struphy.models.toy) Poisson.Options (class in struphy.propagators.propagators_fields) Poisson.Propagators (class in struphy.models.toy) pol (struphy.polar.basic.PolarVector property) polar_ck (struphy.feec.psydac_derham.Derham property) PolarDerhamSpace (class in struphy.polar.basic) PolarExtractionBlocksC1 (class in struphy.polar.extraction_operators) PolarExtractionOperator (class in struphy.polar.linear_operators) PolarLinearOperator (class in struphy.polar.linear_operators) PolarSplines (class in struphy.polar.extraction_operators) PolarSplines_C0_2D (class in struphy.polar.extraction_operators) PolarSplines_C1_2D (class in struphy.polar.extraction_operators) PolarVector (class in struphy.polar.basic) pole (struphy.geometry.base.Domain property) (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) PoloidalSpline (class in struphy.geometry.base) PoloidalSplineStraight (class in struphy.geometry.base) PoloidalSplineTorus (class in struphy.geometry.base) positions (struphy.pic.base.Particles property) post_process_f() (in module struphy.post_processing.post_processing_tools) post_process_markers() (in module struphy.post_processing.post_processing_tools) post_process_n_sph() (in module struphy.post_processing.post_processing_tools) post_process_orbit_classification() (in module struphy.post_processing.orbits.orbits_tools) post_process_orbit_guiding_center() (in module struphy.post_processing.orbits.orbits_tools) power_spectrum_2d() (in module struphy.diagnostics.diagn_tools) powered_ellipse() (in module struphy.geometry.mappings_kernels) powered_ellipse_df() (in module struphy.geometry.mappings_kernels) PoweredEllipticCylinder (class in struphy.geometry.domains) pparams (struphy.models.base.StruphyModel property) ppb (struphy.pic.base.Particles property) ppc (struphy.pic.base.Particles property) pproc() (in module struphy.main) precond (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Options attribute) (struphy.propagators.propagators_coupling.EfieldWeights.Options attribute) (struphy.propagators.propagators_coupling.PressureCoupling6D.Options attribute) (struphy.propagators.propagators_coupling.VlasovAmpere.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) (struphy.propagators.propagators_fields.Hall.Options attribute) (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.JxBCold.Options attribute) (struphy.propagators.propagators_fields.Magnetosonic.Options attribute) (struphy.propagators.propagators_fields.MagnetosonicUniform.Options attribute) (struphy.propagators.propagators_fields.Maxwell.Options attribute) (struphy.propagators.propagators_fields.OhmCold.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute) (struphy.propagators.propagators_fields.ShearAlfven.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenB1.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMomentumAdvection.Options attribute) (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute)

precond_M1 (struphy.propagators.propagators_fields.ShearAlfvenB1.Options attribute) preconditioner (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) prepare_arg() (struphy.geometry.base.Domain static method) prepare_eval_pts() (struphy.geometry.base.Domain static method) prepare_eval_tp_fixed() (struphy.feec.psydac_derham.Derham method) prepare_ghost_particles() (struphy.pic.base.Particles method) prepare_projection_of_basis() (in module struphy.feec.basis_projection_ops) preprocess_irregular_tensor_grid() (psydac.fem.tensor.TensorFemSpace method) preprocess_regular_tensor_grid() (psydac.fem.tensor.TensorFemSpace method) Pressure_transport_operator (class in struphy.feec.variational_utilities) PressureCoupling6D (class in struphy.propagators.propagators_coupling) PressureCoupling6D.GT_MAT_G (class in struphy.propagators.propagators_coupling) PressureCoupling6D.Options (class in struphy.propagators.propagators_coupling) PressureCoupling6D.Variables (class in struphy.propagators.propagators_coupling) PressureCouplingFull6DParallel (class in struphy.dispersion_relations.analytic) PressureLessSPH (class in struphy.models.toy) PressureLessSPH.ColdFluid (class in struphy.models.toy) PressureLessSPH.Propagators (class in struphy.models.toy) prime_ge() (in module struphy.pic.sobol_seq) print_scalar_quantities() (struphy.models.base.StruphyModel method) proj_grid_pts (struphy.feec.psydac_derham.Derham property) proj_grid_subs (struphy.feec.psydac_derham.Derham property) proj_grid_wts (struphy.feec.psydac_derham.Derham property) projected_equil (struphy.models.base.StruphyModel property) (struphy.pic.base.Particles property) (struphy.propagators.base.Propagator property) ProjectedFluidEquilibrium (class in struphy.fields_background.projected_equils), [1] ProjectedFluidEquilibriumWithB (class in struphy.fields_background.projected_equils), [1] ProjectedMHDequilibrium (class in struphy.fields_background.projected_equils), [1] projector_tensor (struphy.feec.projectors.CommutingProjector property) ProjectorPreconditioner (class in struphy.feec.projectors) projectors() (struphy.feec.psydac_derham.DiscreteDerham method) prop_coupling (struphy.models.base.StruphyModel property) prop_fields (struphy.models.base.StruphyModel property) prop_list (struphy.models.base.StruphyModel property) prop_markers (struphy.models.base.StruphyModel property) Propagator (class in struphy.propagators.base) Propagator.Options (class in struphy.propagators.base) Propagator.Variables (class in struphy.propagators.base) psi() (struphy.fields_background.base.AxisymmMHDequilibrium method) (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.CircularTokamak method) (struphy.fields_background.equils.EQDSKequilibrium method) psi_axis_RZ (struphy.fields_background.base.AxisymmMHDequilibrium property) (struphy.fields_background.equils.AdhocTorus property) (struphy.fields_background.equils.AdhocTorusQPsi property) (struphy.fields_background.equils.CircularTokamak property) (struphy.fields_background.equils.EQDSKequilibrium property) psi_r() (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.AdhocTorusQPsi method) psi_range (struphy.fields_background.base.AxisymmMHDequilibrium property) (struphy.fields_background.equils.AdhocTorus property) (struphy.fields_background.equils.AdhocTorusQPsi property) (struphy.fields_background.equils.CircularTokamak property) (struphy.fields_background.equils.EQDSKequilibrium property) psydac.linalg.solvers module pt3 (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) pts (struphy.feec.projectors.CommutingProjectorLocal property) pull() (in module struphy.geometry.transform_kernels) (struphy.geometry.base.Domain method) push() (in module struphy.geometry.transform_kernels) (struphy.geometry.base.Domain method) push_bxu_H1vec() (in module struphy.pic.pushing.pusher_kernels) push_bxu_Hcurl() (in module struphy.pic.pushing.pusher_kernels) push_bxu_Hdiv() (in module struphy.pic.pushing.pusher_kernels) push_bxu_Hdiv_pauli() (in module struphy.pic.pushing.pusher_kernels) push_deterministic_diffusion_stage() (in module struphy.pic.pushing.pusher_kernels) push_eta_stage() (in module struphy.pic.pushing.pusher_kernels) push_gc_Bstar_discrete_gradient_1st_order() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_Bstar_discrete_gradient_1st_order_newton() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_Bstar_discrete_gradient_2nd_order() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_Bstar_explicit_multistage() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_bxEstar_discrete_gradient_1st_order() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_bxEstar_discrete_gradient_1st_order_newton() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_bxEstar_discrete_gradient_2nd_order() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_bxEstar_explicit_multistage() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_cc_J1_H1vec() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_cc_J1_Hcurl() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_cc_J1_Hdiv() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_cc_J2_dg_Hdiv() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_cc_J2_dg_init_Hdiv() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_cc_J2_stage_H1vec() (in module struphy.pic.pushing.pusher_kernels_gc) push_gc_cc_J2_stage_Hdiv() (in module struphy.pic.pushing.pusher_kernels_gc) push_hybrid_xp_ap() (in module struphy.pic.pushing.pusher_kernels) push_hybrid_xp_lnn() (in module struphy.pic.pushing.pusher_kernels) push_pc_eta_stage_H1vec() (in module struphy.pic.pushing.pusher_kernels) push_pc_eta_stage_Hcurl() (in module struphy.pic.pushing.pusher_kernels) push_pc_eta_stage_Hdiv() (in module struphy.pic.pushing.pusher_kernels) push_pc_GXu() (in module struphy.pic.pushing.pusher_kernels) push_pc_GXu_full() (in module struphy.pic.pushing.pusher_kernels) push_pxb_analytic() (in module struphy.pic.pushing.pusher_kernels) push_random_diffusion_stage() (in module struphy.pic.pushing.pusher_kernels) push_v_sph_pressure() (in module struphy.pic.pushing.pusher_kernels) push_v_sph_pressure_ideal_gas() (in module struphy.pic.pushing.pusher_kernels) push_v_viscosity() (in module struphy.pic.pushing.pusher_kernels) push_v_with_efield() (in module struphy.pic.pushing.pusher_kernels) push_vxb_analytic() (in module struphy.pic.pushing.pusher_kernels) push_vxb_implicit() (in module struphy.pic.pushing.pusher_kernels) push_weights_with_efield_lin_va() (in module struphy.pic.pushing.pusher_kernels) PushDeterministicDiffusion (class in struphy.propagators.propagators_markers) PushDeterministicDiffusion.Options (class in struphy.propagators.propagators_markers) PushDeterministicDiffusion.Variables (class in struphy.propagators.propagators_markers) Pusher (class in struphy.pic.pushing.pusher) PushEta (class in struphy.propagators.propagators_markers) PushEta.Options (class in struphy.propagators.propagators_markers) PushEta.Variables (class in struphy.propagators.propagators_markers) PushEtaPC (class in struphy.propagators.propagators_markers) PushEtaPC.Options (class in struphy.propagators.propagators_markers) PushEtaPC.Variables (class in struphy.propagators.propagators_markers) PushGuidingCenterBxEstar (class in struphy.propagators.propagators_markers) PushGuidingCenterBxEstar.Options (class in struphy.propagators.propagators_markers) PushGuidingCenterBxEstar.Variables (class in struphy.propagators.propagators_markers) PushGuidingCenterParallel (class in struphy.propagators.propagators_markers) PushGuidingCenterParallel.Options (class in struphy.propagators.propagators_markers) PushGuidingCenterParallel.Variables (class in struphy.propagators.propagators_markers) PushRandomDiffusion (class in struphy.propagators.propagators_markers) PushRandomDiffusion.Options (class in struphy.propagators.propagators_markers) PushRandomDiffusion.Variables (class in struphy.propagators.propagators_markers) PushVinEfield (class in struphy.propagators.propagators_markers) PushVinEfield.Options (class in struphy.propagators.propagators_markers) PushVinEfield.Variables (class in struphy.propagators.propagators_markers) PushVinSPHpressure (class in struphy.propagators.propagators_markers) PushVinSPHpressure.Options (class in struphy.propagators.propagators_markers) PushVinSPHpressure.Variables (class in struphy.propagators.propagators_markers) PushVinViscousPotential2D (class in struphy.propagators.propagators_markers) PushVinViscousPotential3D (class in struphy.propagators.propagators_markers) PushVxB (class in struphy.propagators.propagators_markers) PushVxB.Options (class in struphy.propagators.propagators_markers) PushVxB.Variables (class in struphy.propagators.propagators_markers) put_particles_in_boxes() (struphy.pic.base.Particles method)

Q

q (struphy.propagators.propagators_fields.VariationalQBEvolve.Variables property) q0 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] q0() (struphy.fields_background.base.FluidEquilibrium method) Q1 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) Q2 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) Q3 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) q3 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] q3() (struphy.fields_background.base.FluidEquilibrium method) q_psi() (struphy.fields_background.equils.AdhocTorusQPsi method) (struphy.fields_background.equils.EQDSKequilibrium method) q_r() (struphy.fields_background.equils.AdhocTorus method) (struphy.fields_background.equils.ScrewPinch method)

q_x() (struphy.fields_background.equils.ShearedSlab method) qt3 (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) quad_grid_bases (struphy.feec.psydac_derham.Derham property) quad_grid_mesh (struphy.feec.projectors.L2Projector property) quad_grid_pts (struphy.feec.projectors.L2Projector property) (struphy.feec.psydac_derham.Derham property) quad_grid_spans (struphy.feec.psydac_derham.Derham property) quad_grid_wts (struphy.feec.psydac_derham.Derham property) quadrature_grid() (in module struphy.bsplines.bsplines) Qv (struphy.feec.basis_projection_ops.BasisProjectionOperators property)

R

R0 (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) R1 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) R2 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) RandomParticleDiffusion (class in struphy.models.toy) RandomParticleDiffusion.Hydrogen (class in struphy.models.toy) RandomParticleDiffusion.Propagators (class in struphy.models.toy) range_R (struphy.fields_background.equils.EQDSKequilibrium property) range_Z (struphy.fields_background.equils.EQDSKequilibrium property) rank (struphy.feec.basis_projection_ops.BasisProjectionOperators property) (struphy.pic.base.Tesselation property) (struphy.propagators.base.Propagator property) rc() (struphy.kinetic_background.maxwellians.CanonicalMaxwellian method) reduce_degree() (psydac.fem.tensor.TensorFemSpace method) reduce_grid() (psydac.fem.tensor.TensorFemSpace method) reject_weights (struphy.pic.base.Particles property) remove_ghost_particles() (struphy.pic.base.Particles method) remove_spurious_entries() (psydac.linalg.block.BlockLinearOperator method) replace_keys() (in module struphy.post_processing.cprofile_analyser)

reset_marker_ids() (struphy.pic.base.Particles method) residual_idx (struphy.pic.base.Particles property) RestelliAnalyticSolutionPotential (class in struphy.initial.perturbations), [1] RestelliAnalyticSolutionVelocity (class in struphy.initial.perturbations), [1] RestelliAnalyticSolutionVelocity_2 (class in struphy.initial.perturbations), [1] RestelliAnalyticSolutionVelocity_3 (class in struphy.initial.perturbations), [1] rho (struphy.io.options.Units property) (struphy.propagators.propagators_fields.AdiabaticPhi property) (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute) (struphy.propagators.propagators_fields.VariationalDensityEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) rho_coeffs (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute) rmin (struphy.fields_background.equils.DESCequilibrium property) RotationMatrix (class in struphy.feec.utilities)

S

s (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalResistivity.Variables property) (struphy.propagators.propagators_fields.VariationalViscosity.Variables property) s0() (struphy.pic.base.Particles method) (struphy.pic.particles.Particles3D method) (struphy.pic.particles.Particles5D method) (struphy.pic.particles.Particles6D method) (struphy.pic.particles.ParticlesSPH method) s0_diatomic (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] s0_diatomic() (struphy.fields_background.base.FluidEquilibrium method) s0_monoatomic (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] s0_monoatomic() (struphy.fields_background.base.FluidEquilibrium method) S1 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) S11 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) S2 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) S21 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) S21p (struphy.feec.basis_projection_ops.BasisProjectionOperators property) s3() (struphy.pic.particles.Particles5D method) s3_diatomic (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] s3_diatomic() (struphy.fields_background.base.FluidEquilibrium method) s3_monoatomic (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] s3_monoatomic() (struphy.fields_background.base.FluidEquilibrium method) SaddlePointSolver (class in struphy.linear_algebra.saddle_point) sampling_density (struphy.pic.base.Particles property) save_constants_of_motion() (struphy.pic.particles.Particles5D method) (struphy.pic.particles.Particles6D method) save_data() (struphy.io.output_handling.DataContainer method) save_magnetic_background_energy() (struphy.pic.particles.Particles5D method) save_magnetic_energy() (struphy.pic.particles.Particles5D method) save_magnetic_moment() (struphy.pic.particles.Particles5D method) scalar_dot() (in module struphy.linear_algebra.linalg_kernels) scalar_quantities (struphy.models.base.StruphyModel property) ScalarMultiplyKineticBackground (class in struphy.kinetic_background.base) scaling() (in module struphy.bsplines.bsplines_kernels) scaling_vector() (in module struphy.bsplines.bsplines) SchurSolver (class in struphy.linear_algebra.schur_solver) SchurSolverFull (class in struphy.linear_algebra.schur_solver) SchurSolverFull3 (class in struphy.linear_algebra.schur_solver) ScrewPinch (class in struphy.fields_background.equils) select_basis_local() (in module struphy.feec.psydac_derham) select_metric_coeff() (in module struphy.geometry.evaluation_kernels) selected_weight (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) self_communication_boxes() (struphy.pic.base.Particles method) sendrecv_all_to_all() (struphy.pic.base.Particles method) sendrecv_all_to_all_boxes() (struphy.pic.base.Particles method) sendrecv_determine_mtbs() (struphy.pic.base.Particles method) sendrecv_get_destinations() (struphy.pic.base.Particles method) sendrecv_markers() (struphy.pic.base.Particles method) sendrecv_markers_boxes() (struphy.pic.base.Particles method) set_backend() (psydac.linalg.block.BlockLinearOperator method) set_blocks() (in module struphy.polar.linear_operators) set_n_to_zero() (struphy.pic.particles.DeltaFParticles6D method) set_particles_symmetric_2d_3v() (in module struphy.pic.sampling_kernels) set_particles_symmetric_3d_3v() (in module struphy.pic.sampling_kernels) set_phys_params() (struphy.models.species.Species method) set_refined_space() (psydac.fem.tensor.TensorFemSpace method) (psydac.fem.vector.VectorFemSpace method) set_tp_coeffs_to_zero() (struphy.polar.basic.PolarVector method) set_tp_rings_to_zero() (in module struphy.polar.basic) set_vector() (struphy.polar.basic.PolarVector method) setup_derham() (in module struphy.io.setup) setup_domain_and_equil() (struphy.models.base.StruphyModel method) setup_equation_params() (struphy.models.base.StruphyModel method) setup_folders() (in module struphy.io.setup) shafranov_dshaped() (in module struphy.geometry.mappings_kernels) shafranov_dshaped_df() (in module struphy.geometry.mappings_kernels) shafranov_shift() (in module struphy.geometry.mappings_kernels) shafranov_shift_df() (in module struphy.geometry.mappings_kernels) shafranov_sqrt() (in module struphy.geometry.mappings_kernels) shafranov_sqrt_df() (in module struphy.geometry.mappings_kernels) ShafranovDshapedCylinder (class in struphy.geometry.domains) ShafranovShiftCylinder (class in struphy.geometry.domains) ShafranovSqrtCylinder (class in struphy.geometry.domains) shape (psydac.linalg.basic.LinearOperator property) Shear_x (class in struphy.initial.perturbations), [1] Shear_y (class in struphy.initial.perturbations), [1] Shear_z (class in struphy.initial.perturbations), [1] ShearAlfven (class in struphy.models.toy) (class in struphy.propagators.propagators_fields) ShearAlfven.EMFields (class in struphy.models.toy) ShearAlfven.MHD (class in struphy.models.toy) ShearAlfven.Options (class in struphy.propagators.propagators_fields) ShearAlfven.Propagators (class in struphy.models.toy) ShearAlfven.Variables (class in struphy.propagators.propagators_fields) ShearAlfvenB1 (class in struphy.propagators.propagators_fields) ShearAlfvenB1.Options (class in struphy.propagators.propagators_fields) ShearAlfvenB1.Variables (class in struphy.propagators.propagators_fields) ShearAlfvenCurrentCoupling5D (class in struphy.propagators.propagators_fields) ShearAlfvenCurrentCoupling5D.Options (class in struphy.propagators.propagators_fields) ShearAlfvenCurrentCoupling5D.Variables (class in struphy.propagators.propagators_fields) ShearedSlab (class in struphy.fields_background.equils) ShearFluid (class in struphy.fields_background.equils) show() (struphy.fields_background.base.MHDequilibrium method) (struphy.geometry.base.Domain method) show_accumulated_spline_field() (struphy.pic.accumulation.particles_to_grid.Accumulator method) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector method) show_distribution_function() (struphy.pic.base.Particles method) show_options() (struphy.models.base.StruphyModel class method) sigma_1 (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) sigma_2 (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) sigma_3 (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) SimData (class in struphy.main) smoothing_kernel() (in module struphy.pic.sph_smoothing_kernels) solve() (psydac.linalg.solvers.BiConjugateGradient method) (psydac.linalg.solvers.BiConjugateGradientStabilized method) (psydac.linalg.solvers.ConjugateGradient method) (psydac.linalg.solvers.GMRES method) (psydac.linalg.solvers.LSMR method) (psydac.linalg.solvers.MinimumResidual method) (psydac.linalg.solvers.PBiConjugateGradientStabilized method) (psydac.linalg.solvers.PConjugateGradient method) (struphy.feec.preconditioner.FFTSolver method) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner method) (struphy.feec.preconditioner.MassMatrixPreconditioner method) (struphy.feec.projectors.CommutingProjector method) (struphy.feec.projectors.CommutingProjectorLocal method) (struphy.feec.projectors.L2Projector method) (struphy.feec.projectors.ProjectorPreconditioner method) solve_triangular() (psydac.linalg.solvers.GMRES method) solve_weighted() (struphy.feec.projectors.CommutingProjectorLocal method) solver (psydac.feec.global_projectors.GlobalProjector property) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner property) (struphy.feec.preconditioner.MassMatrixPreconditioner property) (struphy.feec.projectors.ProjectorPreconditioner property) (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Options attribute) (struphy.propagators.propagators_coupling.EfieldWeights.Options attribute) (struphy.propagators.propagators_coupling.PressureCoupling6D.Options attribute) (struphy.propagators.propagators_coupling.VlasovAmpere.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) (struphy.propagators.propagators_fields.Hall.Options attribute) (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.JxBCold.Options attribute) (struphy.propagators.propagators_fields.Magnetosonic.Options attribute) (struphy.propagators.propagators_fields.MagnetosonicUniform.Options attribute) (struphy.propagators.propagators_fields.Maxwell.Options attribute) (struphy.propagators.propagators_fields.OhmCold.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute) (struphy.propagators.propagators_fields.ShearAlfven.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenB1.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMomentumAdvection.Options attribute) (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) solver_M1 (struphy.propagators.propagators_fields.ShearAlfvenB1.Options attribute) solver_params (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Options attribute) (struphy.propagators.propagators_coupling.EfieldWeights.Options attribute) (struphy.propagators.propagators_coupling.PressureCoupling6D.Options attribute) (struphy.propagators.propagators_coupling.VlasovAmpere.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) (struphy.propagators.propagators_fields.Hall.Options attribute) (struphy.propagators.propagators_fields.HasegawaWakatani.Options attribute) (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.JxBCold.Options attribute) (struphy.propagators.propagators_fields.Magnetosonic.Options attribute) (struphy.propagators.propagators_fields.MagnetosonicUniform.Options attribute) (struphy.propagators.propagators_fields.Maxwell.Options attribute) (struphy.propagators.propagators_fields.OhmCold.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute) (struphy.propagators.propagators_fields.ShearAlfven.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenB1.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) (struphy.propagators.propagators_fields.VariationalDensityEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalMomentumAdvection.Options attribute) (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalResistivity.Options attribute) (struphy.propagators.propagators_fields.VariationalViscosity.Options attribute) solver_params_M1 (struphy.propagators.propagators_fields.ShearAlfvenB1.Options attribute) sort_boxed_particles() (in module struphy.pic.sorting_kernels) sorting_boxes (struphy.pic.base.Particles property) source (struphy.propagators.propagators_fields.TimeDependentSource.Variables property) sources (struphy.propagators.propagators_fields.ImplicitDiffusion property) space (psydac.feec.global_projectors.GlobalProjector property) (psydac.linalg.block.BlockVector property) (psydac.linalg.stencil.StencilVector property) (struphy.feec.preconditioner.FFTSolver property) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner property) (struphy.feec.preconditioner.MassMatrixPreconditioner property) (struphy.feec.projectors.CommutingProjector property) (struphy.feec.projectors.L2Projector property) (struphy.feec.projectors.ProjectorPreconditioner property) (struphy.feec.psydac_derham.SplineFunction property) (struphy.polar.basic.PolarVector property) space_id (struphy.feec.projectors.CommutingProjectorLocal property) (struphy.feec.projectors.L2Projector property) (struphy.feec.psydac_derham.SplineFunction property) (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) (struphy.polar.basic.PolarDerhamSpace property)

space_key (struphy.feec.projectors.CommutingProjectorLocal property) (struphy.feec.projectors.L2Projector property) (struphy.feec.psydac_derham.SplineFunction property) space_to_form (struphy.feec.psydac_derham.Derham property) spaces (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) (struphy.feec.psydac_derham.DiscreteDerham property) spatial (struphy.pic.base.Particles property) species (struphy.models.base.StruphyModel property) spectralanalysis (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) sph_grad_mean_velocity() (in module struphy.pic.pushing.eval_kernels_gc) sph_isotherm_kappa() (in module struphy.pic.pushing.eval_kernels_gc) sph_mean_velocity() (in module struphy.pic.pushing.eval_kernels_gc) sph_mean_velocity_coeffs() (in module struphy.pic.pushing.eval_kernels_gc) sph_pressure_coeffs() (in module struphy.pic.pushing.eval_kernels_gc) sph_viscosity_tensor() (in module struphy.pic.pushing.eval_kernels_gc) SPHVariable (class in struphy.models.variables) spl_kind (struphy.feec.psydac_derham.Derham property) (struphy.geometry.base.Domain property) Spline (class in struphy.geometry.base) spline_2d_straight() (in module struphy.geometry.mappings_kernels) spline_2d_straight_df() (in module struphy.geometry.mappings_kernels) spline_2d_torus() (in module struphy.geometry.mappings_kernels) spline_2d_torus_df() (in module struphy.geometry.mappings_kernels) spline_3d() (in module struphy.geometry.mappings_kernels) spline_3d_df() (in module struphy.geometry.mappings_kernels) spline_interpolation_nd() (in module struphy.geometry.base) spline_types (struphy.feec.psydac_derham.Derham property) spline_types_pyccel (struphy.feec.psydac_derham.Derham property) spline_values (struphy.main.SimData property) SplineFunction (class in struphy.feec.psydac_derham) sqrt_g() (struphy.feec.basis_projection_ops.BasisProjectionOperators method) (struphy.feec.mass.WeightedMassOperatorsOldForTesting method) stab_eps (struphy.propagators.propagators_fields.Poisson.Options attribute) stab_mat (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute) stab_sigma (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) start_update_interface_ghost_regions() (psydac.linalg.block.BlockVector method) starts (psydac.linalg.stencil.StencilVector property) (struphy.feec.psydac_derham.SplineFunction property) (struphy.pic.base.Tesselation property) (struphy.polar.basic.PolarDerhamSpace property) state (struphy.fields_background.equils.GVECequilibrium property) StencilMatrixFreeMassOperator (class in struphy.feec.mass) StencilVector (class in psydac.linalg.stencil) struphy.bsplines.bsplines module struphy.bsplines.bsplines_kernels module struphy.bsplines.evaluation_kernels_1d module struphy.bsplines.evaluation_kernels_2d module struphy.bsplines.evaluation_kernels_3d module struphy.bsplines.shapefunc_kernels module struphy.diagnostics.continuous_spectra module struphy.diagnostics.diagn_tools module struphy.dispersion_relations.analytic module struphy.dispersion_relations.base module struphy.feec.basis_projection_ops module struphy.feec.linear_operators module struphy.feec.mass module struphy.feec.preconditioner module struphy.feec.projectors module struphy.feec.psydac_derham module struphy.feec.utilities module struphy.feec.variational_utilities module struphy.fields_background.base module struphy.fields_background.equils module struphy.fields_background.generic module struphy.fields_background.projected_equils module, [1] struphy.geometry.base module struphy.geometry.domains module struphy.geometry.evaluation_kernels module struphy.geometry.mappings_kernels module struphy.geometry.transform_kernels module struphy.geometry.utilities module struphy.initial.perturbations module, [1] struphy.initial.utilities module struphy.io.output_handling module struphy.io.setup module struphy.kinetic_background.base module struphy.kinetic_background.maxwellians module struphy.linear_algebra.linalg_kernels module struphy.linear_algebra.linalg_kron module struphy.linear_algebra.saddle_point module struphy.linear_algebra.schur_solver module struphy.main module struphy.models.base module struphy.models.fluid module struphy.models.hybrid module struphy.models.kinetic module struphy.models.toy module struphy.ode.solvers module struphy.ode.utils module struphy.pic.accumulation.accum_kernels module struphy.pic.accumulation.accum_kernels_gc module struphy.pic.accumulation.filter_kernels module struphy.pic.accumulation.particles_to_grid module struphy.pic.base module struphy.pic.particles module struphy.pic.pushing.eval_kernels_gc module struphy.pic.pushing.pusher_kernels module struphy.pic.pushing.pusher_kernels_gc module struphy.pic.sampling_kernels module struphy.pic.sobol_seq module struphy.pic.sorting_kernels module struphy.pic.sph_eval_kernels module struphy.pic.sph_smoothing_kernels module struphy.pic.utilities module struphy.polar.basic module struphy.polar.extraction_operators module struphy.polar.linear_operators module struphy.post_processing.cprofile_analyser module struphy.post_processing.orbits.orbits_kernels module struphy.post_processing.orbits.orbits_tools module struphy.post_processing.post_processing_tools module struphy.propagators.base module struphy.propagators.propagators_coupling module struphy.propagators.propagators_fields module struphy.propagators.propagators_markers module StruphyModel (class in struphy.models.base) StruphyModel.Propagators (class in struphy.models.base) SumKineticBackground (class in struphy.kinetic_background.base) Sv (struphy.feec.basis_projection_ops.BasisProjectionOperators property) svol() (struphy.pic.base.Particles method) (struphy.pic.particles.Particles3D method) (struphy.pic.particles.Particles5D method) (struphy.pic.particles.Particles6D method) (struphy.pic.particles.ParticlesSPH method) symbolic_space (psydac.fem.tensor.TensorFemSpace property) (psydac.fem.vector.VectorFemSpace property) symmetry (struphy.feec.mass.WeightedMassOperator property) (struphy.pic.accumulation.particles_to_grid.Accumulator property)

T

T (psydac.linalg.basic.LinearOperator property) (struphy.geometry.base.Domain property) t (struphy.io.options.Units property) t0 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] t0() (struphy.fields_background.base.FluidEquilibrium method) T1 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) T2 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) t3 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] t3() (struphy.fields_background.base.FluidEquilibrium method) T_z() (struphy.fields_background.equils.ShearFluid method) tau (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) TensorFemSpace (class in psydac.fem.tensor) TensorProductGrid (class in struphy.topology.grids) Tesselation (class in struphy.pic.base) tesselation (struphy.pic.base.Particles property) thermodynamics (struphy.propagators.propagators_markers.PushVinSPHpressure.Options attribute) threshold (struphy.pic.base.Particles property) tile_breaks (struphy.pic.base.Tesselation property) tile_int_kernel() (in module struphy.pic.sampling_kernels) tile_midpoints (struphy.pic.base.Tesselation property) tile_quad_pts (struphy.pic.base.Tesselation property) tile_quad_wts (struphy.pic.base.Tesselation property) tile_volume (struphy.pic.base.Tesselation property) tiles_pb (struphy.pic.base.Tesselation property) Time (class in struphy.io.options) time_state (struphy.models.base.StruphyModel property) (struphy.propagators.base.Propagator property) TimeDependentSource (class in struphy.propagators.propagators_fields) TimeDependentSource.Options (class in struphy.propagators.propagators_fields) TimeDependentSource.Variables (class in struphy.propagators.propagators_fields) toarray (struphy.feec.basis_projection_ops.BasisProjectionOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal property) (struphy.feec.basis_projection_ops.CoordinateInclusion property) (struphy.feec.basis_projection_ops.CoordinateProjector property) (struphy.feec.linear_operators.BoundaryOperator property) (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.variational_utilities.BracketOperator property) (struphy.feec.variational_utilities.Hdiv0_transport_operator property) (struphy.feec.variational_utilities.L2_transport_operator property) (struphy.feec.variational_utilities.Pressure_transport_operator property) (struphy.polar.linear_operators.PolarExtractionOperator property) (struphy.polar.linear_operators.PolarLinearOperator property) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G property) toarray() (psydac.linalg.basic.LinearOperator method) (psydac.linalg.block.BlockLinearOperator method) (psydac.linalg.block.BlockVector method) (psydac.linalg.stencil.StencilVector method) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner method) (struphy.feec.preconditioner.MassMatrixPreconditioner method) (struphy.feec.projectors.ProjectorPreconditioner method) (struphy.polar.basic.PolarVector method) toarray_local() (psydac.linalg.block.BlockVector method) (psydac.linalg.stencil.StencilVector method) toarray_struphy() (struphy.feec.linear_operators.LinOpWithTransp method) toarray_tp() (struphy.polar.basic.PolarVector method) Tokamak (class in struphy.geometry.domains) TokamakManufacturedSolutionVelocity (class in struphy.initial.perturbations), [1] TokamakManufacturedSolutionVelocity_1 (class in struphy.initial.perturbations), [1] TokamakManufacturedSolutionVelocity_2 (class in struphy.initial.perturbations), [1] tol (struphy.pic.pushing.pusher.Pusher property) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute) topetsc() (psydac.linalg.block.BlockLinearOperator method) (psydac.linalg.block.BlockVector method) (psydac.linalg.stencil.StencilVector method) TorusModesCos (class in struphy.initial.perturbations), [1] TorusModesSin (class in struphy.initial.perturbations), [1] tosparse (struphy.feec.basis_projection_ops.BasisProjectionOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal property) (struphy.feec.basis_projection_ops.CoordinateInclusion property) (struphy.feec.basis_projection_ops.CoordinateProjector property) (struphy.feec.linear_operators.BoundaryOperator property) (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.variational_utilities.BracketOperator property) (struphy.feec.variational_utilities.Hdiv0_transport_operator property) (struphy.feec.variational_utilities.L2_transport_operator property) (struphy.feec.variational_utilities.Pressure_transport_operator property) (struphy.polar.linear_operators.PolarExtractionOperator property) (struphy.polar.linear_operators.PolarLinearOperator property) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G property)

tosparse() (psydac.linalg.basic.LinearOperator method) (psydac.linalg.block.BlockLinearOperator method) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner method) (struphy.feec.preconditioner.MassMatrixPreconditioner method) (struphy.feec.projectors.ProjectorPreconditioner method) tp (struphy.polar.basic.PolarVector property) tp_blocks (struphy.polar.linear_operators.PolarLinearOperator property) tp_blocks_shapes (struphy.polar.linear_operators.PolarLinearOperator property) tp_operator (struphy.polar.linear_operators.PolarLinearOperator property) tran() (in module struphy.geometry.transform_kernels) transform() (psydac.linalg.block.BlockLinearOperator method) (struphy.geometry.base.Domain method) transform_perturbation() (in module struphy.feec.psydac_derham) TransformedPformComponent (class in struphy.geometry.utilities) transpose() (in module struphy.linear_algebra.linalg_kernels) (psydac.linalg.basic.LinearOperator method) (psydac.linalg.block.BlockLinearOperator method) (struphy.feec.basis_projection_ops.BasisProjectionOperator method) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal method) (struphy.feec.basis_projection_ops.CoordinateInclusion method) (struphy.feec.basis_projection_ops.CoordinateProjector method) (struphy.feec.linear_operators.BoundaryOperator method) (struphy.feec.linear_operators.LinOpWithTransp method) (struphy.feec.mass.StencilMatrixFreeMassOperator method) (struphy.feec.mass.WeightedMassOperator method) (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner method) (struphy.feec.preconditioner.MassMatrixPreconditioner method) (struphy.feec.projectors.ProjectorPreconditioner method) (struphy.feec.variational_utilities.BracketOperator method) (struphy.feec.variational_utilities.Hdiv0_transport_operator method) (struphy.feec.variational_utilities.L2_transport_operator method) (struphy.feec.variational_utilities.Pressure_transport_operator method) (struphy.polar.linear_operators.PolarExtractionOperator method) (struphy.polar.linear_operators.PolarLinearOperator method) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G method) transpose_block_mat() (in module struphy.polar.linear_operators) transposed (struphy.feec.basis_projection_ops.BasisProjectionOperator property) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal property) (struphy.feec.projectors.ProjectorPreconditioner property) (struphy.polar.linear_operators.PolarExtractionOperator property) (struphy.polar.linear_operators.PolarLinearOperator property) (struphy.propagators.propagators_coupling.PressureCoupling6D.GT_MAT_G property) trigonometric_1d() (in module struphy.pic.sph_smoothing_kernels) trigonometric_2d() (in module struphy.pic.sph_smoothing_kernels) trigonometric_3d() (in module struphy.pic.sph_smoothing_kernels) trigonometric_uni() (in module struphy.pic.sph_smoothing_kernels) Tv (struphy.feec.basis_projection_ops.BasisProjectionOperators property) TwoFluidQuasiNeutralFull (class in struphy.propagators.propagators_fields) TwoFluidQuasiNeutralFull.Options (class in struphy.propagators.propagators_fields) TwoFluidQuasiNeutralFull.Variables (class in struphy.propagators.propagators_fields) TwoFluidQuasiNeutralToy (class in struphy.models.toy) TwoFluidQuasiNeutralToy.Electrons (class in struphy.models.toy) TwoFluidQuasiNeutralToy.EMfields (class in struphy.models.toy) TwoFluidQuasiNeutralToy.Ions (class in struphy.models.toy) TwoFluidQuasiNeutralToy.Propagators (class in struphy.models.toy) type (struphy.pic.base.Particles property) type_of_basis_3 (struphy.polar.basic.PolarDerhamSpace property)

U

u (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Variables property) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Variables property) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Variables property) (struphy.propagators.propagators_coupling.PressureCoupling6D.Variables property) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Variables property) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Variables property) (struphy.propagators.propagators_fields.Magnetosonic.Variables property) (struphy.propagators.propagators_fields.MagnetosonicUniform.Variables property) (struphy.propagators.propagators_fields.ShearAlfven.Variables property) (struphy.propagators.propagators_fields.ShearAlfvenB1.Variables property) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Variables property) (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Variables property) (struphy.propagators.propagators_fields.VariationalDensityEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalEntropyEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalMagFieldEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalMomentumAdvection.Variables property) (struphy.propagators.propagators_fields.VariationalPBEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalQBEvolve.Variables property) (struphy.propagators.propagators_fields.VariationalViscosity.Variables property) u() (struphy.kinetic_background.base.KineticBackground method) (struphy.kinetic_background.base.ScalarMultiplyKineticBackground method) (struphy.kinetic_background.base.SumKineticBackground method) (struphy.kinetic_background.maxwellians.ColdPlasma method) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D method) (struphy.kinetic_background.maxwellians.Maxwellian3D method) U1 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) u1 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] u1() (struphy.fields_background.base.FluidEquilibrium method) (struphy.fields_background.base.MHDequilibrium method) u1_1() (struphy.fields_background.base.FluidEquilibrium method) u1_2() (struphy.fields_background.base.FluidEquilibrium method) u1_3() (struphy.fields_background.base.FluidEquilibrium method) u2 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] (struphy.propagators.propagators_fields.VariationalPBEvolve.Options attribute) (struphy.propagators.propagators_fields.VariationalQBEvolve.Options attribute) u2() (struphy.fields_background.base.FluidEquilibrium method) (struphy.fields_background.base.MHDequilibrium method) u2_1() (struphy.fields_background.base.FluidEquilibrium method) u2_2() (struphy.fields_background.base.FluidEquilibrium method) u2_3() (struphy.fields_background.base.FluidEquilibrium method) u_cart() (struphy.fields_background.base.FluidEquilibrium method) (struphy.fields_background.base.MHDequilibrium method) u_cart_1() (struphy.fields_background.base.FluidEquilibrium method) u_cart_2() (struphy.fields_background.base.FluidEquilibrium method) u_cart_3() (struphy.fields_background.base.FluidEquilibrium method) u_init (struphy.pic.base.Particles property) u_para0 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] u_para0() (struphy.fields_background.base.FluidEquilibriumWithB method) u_para3 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] u_para3() (struphy.fields_background.base.FluidEquilibriumWithB method) u_space (struphy.propagators.propagators_coupling.CurrentCoupling5DCurlb.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling5DGradB.Options attribute) (struphy.propagators.propagators_coupling.CurrentCoupling6DCurrent.Options attribute) (struphy.propagators.propagators_coupling.PressureCoupling6D.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling5DDensity.Options attribute) (struphy.propagators.propagators_fields.CurrentCoupling6DDensity.Options attribute) (struphy.propagators.propagators_fields.Magnetosonic.Options attribute) (struphy.propagators.propagators_fields.ShearAlfven.Options attribute) (struphy.propagators.propagators_fields.ShearAlfvenCurrentCoupling5D.Options attribute) (struphy.propagators.propagators_markers.PushEtaPC.Options attribute) u_tilde (struphy.propagators.propagators_markers.PushEtaPC.Options attribute) u_xyz() (struphy.fields_background.base.CartesianFluidEquilibrium method) (struphy.fields_background.equils.ConstantVelocity method) (struphy.fields_background.equils.HomogenSlabITG method) (struphy.fields_background.generic.GenericCartesianFluidEquilibrium method)

ue (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Variables property) unflatten_index() (in module struphy.pic.sorting_kernels) unit_b1 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] unit_b1() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b1_1() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b1_2() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b1_3() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b1_h (struphy.pic.particles.Particles5D property) unit_b2 (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] unit_b2() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b2_1() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b2_2() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b2_3() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_b_1form() (in module struphy.pic.pushing.eval_kernels_gc) unit_b_cart() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_bv (struphy.fields_background.projected_equils.ProjectedFluidEquilibriumWithB property), [1] unit_bv() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_bv_1() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_bv_2() (struphy.fields_background.base.FluidEquilibriumWithB method) unit_bv_3() (struphy.fields_background.base.FluidEquilibriumWithB method) Units (class in struphy.io.options) units (struphy.fields_background.equils.DESCequilibrium property) (struphy.fields_background.equils.EQDSKequilibrium property) (struphy.fields_background.equils.GVECequilibrium property) (struphy.models.base.StruphyModel property) update_coeffs() (struphy.feec.variational_utilities.Hdiv0_transport_operator method) (struphy.feec.variational_utilities.L2_transport_operator method) (struphy.feec.variational_utilities.Pressure_transport_operator method) update_distr_functions() (struphy.models.base.StruphyModel method) update_feec_variables() (struphy.propagators.base.Propagator method) update_ghost_particles() (struphy.pic.base.Particles method) update_ghost_regions() (psydac.linalg.block.BlockLinearOperator method) (psydac.linalg.block.BlockVector method) (psydac.linalg.stencil.StencilVector method) (struphy.polar.basic.PolarVector method) update_holes() (struphy.pic.base.Particles method) update_markers_to_be_saved() (struphy.models.base.StruphyModel method) update_mass_operator() (struphy.feec.preconditioner.MassMatrixDiagonalPreconditioner method) update_rho() (struphy.models.fluid.HasegawaWakatani method) update_scalar() (struphy.models.base.StruphyModel method) update_scalar_quantities() (struphy.models.base.StruphyModel method) update_u() (struphy.feec.variational_utilities.BracketOperator method) update_valid_mks() (struphy.pic.base.Particles method) update_weight() (struphy.feec.mass.WeightedMassOperators.H1vecMassMatrix_density method) (struphy.feec.variational_utilities.H1vecMassMatrix_density method) update_weights() (struphy.feec.basis_projection_ops.BasisProjectionOperator method) (struphy.feec.basis_projection_ops.BasisProjectionOperatorLocal method) (struphy.pic.base.Particles method) use_nfp (struphy.fields_background.equils.DESCequilibrium property) use_perp_model (struphy.propagators.propagators_coupling.PressureCoupling6D.Options attribute) (struphy.propagators.propagators_markers.PushEtaPC.Options attribute) Uv (struphy.feec.basis_projection_ops.BasisProjectionOperators property) uv (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] uv() (struphy.fields_background.base.FluidEquilibrium method) (struphy.fields_background.base.LogicalFluidEquilibrium method) (struphy.fields_background.base.MHDequilibrium method) uv_1() (struphy.fields_background.base.FluidEquilibrium method) uv_2() (struphy.fields_background.base.FluidEquilibrium method) uv_3() (struphy.fields_background.base.FluidEquilibrium method)

V

v (struphy.io.options.Units property) V0 (struphy.feec.psydac_derham.DiscreteDerham property) V1 (struphy.feec.psydac_derham.DiscreteDerham property) V2 (struphy.feec.psydac_derham.DiscreteDerham property) V3 (struphy.feec.psydac_derham.DiscreteDerham property) valid_mks (struphy.pic.base.Particles property) var (struphy.propagators.propagators_markers.PushDeterministicDiffusion.Variables property) (struphy.propagators.propagators_markers.PushEta.Variables property) (struphy.propagators.propagators_markers.PushEtaPC.Variables property) (struphy.propagators.propagators_markers.PushRandomDiffusion.Variables property) (struphy.propagators.propagators_markers.PushVinEfield.Variables property) var1 (struphy.propagators.base.Propagator.Variables property) variant (struphy.propagators.propagators_fields.TwoFluidQuasiNeutralFull.Options attribute) VariationalBarotropicFluid (class in struphy.models.toy) VariationalBarotropicFluid.Fluid (class in struphy.models.toy) VariationalBarotropicFluid.Propagators (class in struphy.models.toy) VariationalCompressibleFluid (class in struphy.models.toy) VariationalCompressibleFluid.Fluid (class in struphy.models.toy) VariationalCompressibleFluid.Propagators (class in struphy.models.toy) VariationalDensityEvolve (class in struphy.propagators.propagators_fields) VariationalDensityEvolve.Options (class in struphy.propagators.propagators_fields) VariationalDensityEvolve.Variables (class in struphy.propagators.propagators_fields) VariationalEntropyEvolve (class in struphy.propagators.propagators_fields) VariationalEntropyEvolve.Options (class in struphy.propagators.propagators_fields) VariationalEntropyEvolve.Variables (class in struphy.propagators.propagators_fields) VariationalMagFieldEvolve (class in struphy.propagators.propagators_fields) VariationalMagFieldEvolve.Options (class in struphy.propagators.propagators_fields) VariationalMagFieldEvolve.Variables (class in struphy.propagators.propagators_fields) VariationalMomentumAdvection (class in struphy.propagators.propagators_fields) VariationalMomentumAdvection.Options (class in struphy.propagators.propagators_fields) VariationalMomentumAdvection.Variables (class in struphy.propagators.propagators_fields) VariationalPBEvolve (class in struphy.propagators.propagators_fields) VariationalPBEvolve.Options (class in struphy.propagators.propagators_fields) VariationalPBEvolve.Variables (class in struphy.propagators.propagators_fields) VariationalPressurelessFluid (class in struphy.models.toy) VariationalPressurelessFluid.Fluid (class in struphy.models.toy) VariationalPressurelessFluid.Propagators (class in struphy.models.toy) VariationalQBEvolve (class in struphy.propagators.propagators_fields) VariationalQBEvolve.Options (class in struphy.propagators.propagators_fields) VariationalQBEvolve.Variables (class in struphy.propagators.propagators_fields) VariationalResistivity (class in struphy.propagators.propagators_fields) VariationalResistivity.Options (class in struphy.propagators.propagators_fields) VariationalResistivity.Variables (class in struphy.propagators.propagators_fields) VariationalViscosity (class in struphy.propagators.propagators_fields) VariationalViscosity.Options (class in struphy.propagators.propagators_fields) VariationalViscosity.Variables (class in struphy.propagators.propagators_fields) vdim (struphy.kinetic_background.base.KineticBackground property) (struphy.kinetic_background.base.ScalarMultiplyKineticBackground property) (struphy.kinetic_background.base.SumKineticBackground property) (struphy.kinetic_background.maxwellians.ColdPlasma property) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D property) (struphy.kinetic_background.maxwellians.Maxwellian3D property) (struphy.pic.base.Particles property) (struphy.pic.particles.Particles3D property) (struphy.pic.particles.Particles5D property) (struphy.pic.particles.Particles6D property) (struphy.pic.particles.ParticlesSPH property) vector (struphy.feec.psydac_derham.SplineFunction property) (struphy.initial.utilities.InitFromOutput property) vector_field (struphy.ode.solvers.ODEsolverFEEC property) vector_stencil (struphy.feec.psydac_derham.SplineFunction property) VectorFemSpace (class in psydac.fem.vector) vectors (struphy.pic.accumulation.particles_to_grid.Accumulator property) (struphy.pic.accumulation.particles_to_grid.AccumulatorVector property) velocities (struphy.pic.base.Particles property) velocity_jacobian_det() (struphy.kinetic_background.base.KineticBackground method) (struphy.kinetic_background.base.ScalarMultiplyKineticBackground method) (struphy.kinetic_background.base.SumKineticBackground method) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian method) (struphy.kinetic_background.maxwellians.ColdPlasma method) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D method) (struphy.kinetic_background.maxwellians.Maxwellian3D method) velocity_scale (struphy.dispersion_relations.base.DispersionRelations1D property) (struphy.models.base.StruphyModel property) verbose (struphy.feec.basis_projection_ops.BasisProjectionOperators property) (struphy.feec.mass.WeightedMassOperators property) (struphy.models.base.StruphyModel property) (struphy.pic.base.Particles property) (struphy.pic.pushing.pusher.Pusher property) (struphy.propagators.propagators_markers.PushGuidingCenterBxEstar.Options attribute) (struphy.propagators.propagators_markers.PushGuidingCenterParallel.Options attribute)

Vh (struphy.feec.psydac_derham.Derham property) Vh_fem (struphy.feec.psydac_derham.Derham property) Vh_pol (struphy.feec.psydac_derham.Derham property) video_2d() (in module struphy.diagnostics.diagn_tools) ViscoResistiveDeltafMHD (class in struphy.models.fluid) ViscoResistiveDeltafMHD.Diagnostics (class in struphy.models.fluid) ViscoResistiveDeltafMHD.EMFields (class in struphy.models.fluid) ViscoResistiveDeltafMHD.MHD (class in struphy.models.fluid) ViscoResistiveDeltafMHD.Propagators (class in struphy.models.fluid) ViscoResistiveDeltafMHD_with_q (class in struphy.models.fluid) ViscoResistiveDeltafMHD_with_q.Diagnostics (class in struphy.models.fluid) ViscoResistiveDeltafMHD_with_q.EMFields (class in struphy.models.fluid) ViscoResistiveDeltafMHD_with_q.MHD (class in struphy.models.fluid) ViscoResistiveDeltafMHD_with_q.Propagators (class in struphy.models.fluid) ViscoResistiveLinearMHD (class in struphy.models.fluid) ViscoResistiveLinearMHD.Diagnostics (class in struphy.models.fluid) ViscoResistiveLinearMHD.EMFields (class in struphy.models.fluid) ViscoResistiveLinearMHD.MHD (class in struphy.models.fluid) ViscoResistiveLinearMHD.Propagators (class in struphy.models.fluid) ViscoResistiveLinearMHD_with_q (class in struphy.models.fluid) ViscoResistiveLinearMHD_with_q.Diagnostics (class in struphy.models.fluid) ViscoResistiveLinearMHD_with_q.EMFields (class in struphy.models.fluid) ViscoResistiveLinearMHD_with_q.MHD (class in struphy.models.fluid) ViscoResistiveLinearMHD_with_q.Propagators (class in struphy.models.fluid) ViscoResistiveMHD (class in struphy.models.fluid) ViscoResistiveMHD.EMFields (class in struphy.models.fluid) ViscoResistiveMHD.MHD (class in struphy.models.fluid) ViscoResistiveMHD.Propagators (class in struphy.models.fluid) ViscoResistiveMHD_with_p (class in struphy.models.fluid) ViscoResistiveMHD_with_p.Diagnostics (class in struphy.models.fluid) ViscoResistiveMHD_with_p.EMFields (class in struphy.models.fluid) ViscoResistiveMHD_with_p.MHD (class in struphy.models.fluid) ViscoResistiveMHD_with_p.Propagators (class in struphy.models.fluid) ViscoResistiveMHD_with_q (class in struphy.models.fluid) ViscoResistiveMHD_with_q.Diagnostics (class in struphy.models.fluid) ViscoResistiveMHD_with_q.EMFields (class in struphy.models.fluid) ViscoResistiveMHD_with_q.MHD (class in struphy.models.fluid) ViscoResistiveMHD_with_q.Propagators (class in struphy.models.fluid) ViscousFluid (class in struphy.models.fluid) ViscousFluid.Fluid (class in struphy.models.fluid) ViscousFluid.Propagators (class in struphy.models.fluid) Vlasov (class in struphy.models.toy) Vlasov.KineticIons (class in struphy.models.toy) Vlasov.Propagators (class in struphy.models.toy) vlasov_maxwell() (in module struphy.pic.accumulation.accum_kernels) VlasovAmpere (class in struphy.propagators.propagators_coupling) VlasovAmpere.Options (class in struphy.propagators.propagators_coupling) VlasovAmpere.Variables (class in struphy.propagators.propagators_coupling) VlasovAmpereOneSpecies (class in struphy.models.kinetic) VlasovAmpereOneSpecies.EMFields (class in struphy.models.kinetic) VlasovAmpereOneSpecies.KineticIons (class in struphy.models.kinetic) VlasovAmpereOneSpecies.Propagators (class in struphy.models.kinetic) VlasovMaxwellOneSpecies (class in struphy.models.kinetic) VlasovMaxwellOneSpecies.EMFields (class in struphy.models.kinetic) VlasovMaxwellOneSpecies.KineticIons (class in struphy.models.kinetic) VlasovMaxwellOneSpecies.Propagators (class in struphy.models.kinetic) volume_form (struphy.kinetic_background.base.KineticBackground property) (struphy.kinetic_background.base.ScalarMultiplyKineticBackground property) (struphy.kinetic_background.base.SumKineticBackground property) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian property) (struphy.kinetic_background.maxwellians.ColdPlasma property) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D property) (struphy.kinetic_background.maxwellians.Maxwellian3D property) vth() (struphy.kinetic_background.base.Maxwellian method) (struphy.kinetic_background.maxwellians.CanonicalMaxwellian method) (struphy.kinetic_background.maxwellians.ColdPlasma method) (struphy.kinetic_background.maxwellians.GyroMaxwellian2D method) (struphy.kinetic_background.maxwellians.Maxwellian3D method) vth0 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] vth0() (struphy.fields_background.base.FluidEquilibrium method) vth3 (struphy.fields_background.projected_equils.ProjectedFluidEquilibrium property), [1] vth3() (struphy.fields_background.base.FluidEquilibrium method)

W

W1 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) WeightedMassOperator (class in struphy.feec.mass) WeightedMassOperators (class in struphy.feec.mass) WeightedMassOperators.H1vecMassMatrix_density (class in struphy.feec.mass) WeightedMassOperatorsOldForTesting (class in struphy.feec.mass) weights (struphy.feec.basis_projection_ops.BasisProjectionOperators property) (struphy.feec.mass.StencilMatrixFreeMassOperator property) (struphy.feec.mass.WeightedMassOperator property) (struphy.feec.mass.WeightedMassOperators property) (struphy.feec.mass.WeightedMassOperatorsOldForTesting property) (struphy.pic.base.Particles property)

weights0 (struphy.pic.base.Particles property) weights_params (struphy.pic.base.Particles property) WeightsParameters (class in struphy.pic.utilities), [1] whij (struphy.feec.projectors.CommutingProjectorLocal property) wij (struphy.feec.projectors.CommutingProjectorLocal property) with_local_projectors (struphy.feec.psydac_derham.Derham property) WMM (struphy.feec.mass.WeightedMassOperators property) write_parameters_to_file() (struphy.models.base.StruphyModel class method) wts (struphy.feec.projectors.CommutingProjectorLocal property)

X

x (struphy.io.options.Units property) x0 (struphy.propagators.propagators_fields.AdiabaticPhi property) (struphy.propagators.propagators_fields.ImplicitDiffusion property) (struphy.propagators.propagators_fields.ImplicitDiffusion.Options attribute) (struphy.propagators.propagators_fields.Poisson.Options attribute)

X1 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) X2 (struphy.feec.basis_projection_ops.BasisProjectionOperators property) xi_0 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) xi_1 (struphy.polar.extraction_operators.PolarExtractionBlocksC1 property) Xv (struphy.feec.basis_projection_ops.BasisProjectionOperators property)

Y

y (struphy.ode.solvers.ODEsolverFEEC property)

yn (struphy.ode.solvers.ODEsolverFEEC property)

Z

zeros() (struphy.polar.basic.PolarDerhamSpace method)